RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 EEF1A2Q05639 463 aaKnown RBP11.08□□□□□ -0.64
HDAC4-210ENST00000493582 DOC2AQ14183 400 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 GSG1Q2KHT4 349 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 ANXA8L1Q5VT79 327 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 RGS7BPQ6MZT1 257 aaPredicted RBP11.08□□□□□ -0.64
HDAC4-210ENST00000493582 PGBD2Q6P3X8 592 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 MTFR2Q6P444 385 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 ARIH2OSQ8N7S6 290 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 DDOQ99489 341 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 ARHGAP9Q9BRR9 750 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 KATNBL1Q9H079 304 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 SLC6A17Q9H1V8 727 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 MAGEH1Q9H213 219 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 MVB12BQ9H7P6 319 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 IFT22Q9H7X7 185 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 CRLS1Q9UJA2 301 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 SCP2D1Q9UJQ7 156 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 CLEC4AQ9UMR7 237 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 TMEM5Q9Y2B1 443 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 CSNK1G3Q9Y6M4 447 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 ARRDC5A6NEK1 342 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 SH3BP5O60239 455 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 SLC19A2O60779 497 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 HIST1H2AGP0C0S8 130 aaPredicted RBP11.07□□□□□ -0.64
HDAC4-210ENST00000493582 SULT1A3P0DMM9 295 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 SULT1A4P0DMN0 295 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 JUPP14923 745 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 HIST1H2ADP20671 130 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 TAF12Q16514 161 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 SLC36A2Q495M3 483 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 SFRP5Q5T4F7 317 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 TCTN3Q6NUS6 607 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 C3P1Q6ZMU1 363 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 NLRC3Q7RTR2 1065 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 LRRC70Q7Z2Q7 622 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 APOBEC3FQ8IUX4 373 aaKnown RBP11.07□□□□□ -0.64
HDAC4-210ENST00000493582 OR52N2Q8NGI0 321 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 MOSPD2Q8NHP6 518 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 SLC7A13Q8TCU3 470 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 GIMAP5Q96F15 307 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 HIST1H2AHQ96KK5 128 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 OR4K3Q96R72 315 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 NPAS1Q99742 590 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 HIST1H2AJQ99878 128 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 H2AFJQ9BTM1 129 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 PDGFDQ9GZP0 370 aaPredicted RBP11.07□□□□□ -0.64
HDAC4-210ENST00000493582 SPRTNQ9H040 489 aaPredicted RBP11.07□□□□□ -0.64
HDAC4-210ENST00000493582 ZFR2Q9UPR6 939 aaKnown RBP11.07□□□□□ -0.64
HDAC4-210ENST00000493582 MGAT4BQ9UQ53 548 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 A0A1B0GVI7 797 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 IFNA14P01570 189 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 ALDOBP05062 364 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 RAB3AP20336 220 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 RPS12P25398 132 aaKnown RBP11.07□□□□□ -0.64
HDAC4-210ENST00000493582 VIPR1P32241 457 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 CCR7P32248 378 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 RPL9P32969 192 aaKnown RBP11.07□□□□□ -0.64
HDAC4-210ENST00000493582 GIPRP48546 466 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 RPS26P62854 115 aaKnown RBP11.07□□□□□ -0.64
HDAC4-210ENST00000493582 ZNF169Q14929 603 aaPredicted RBP11.07□□□□□ -0.64
HDAC4-210ENST00000493582 ETFDHQ16134 617 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 DUSP28Q4G0W2 176 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 ALKAL2Q6UX46 152 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 PLEKHH3Q7Z736 793 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 IL17RCQ8NAC3 791 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 MRPS31Q92665 395 aaKnown RBP11.07□□□□□ -0.64
HDAC4-210ENST00000493582 C11orf24Q96F05 449 aaPredicted RBP11.07□□□□□ -0.64
HDAC4-210ENST00000493582 SYT17Q9BSW7 474 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 OSGEPL1Q9H4B0 414 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 ZCCHC4Q9H5U6 513 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 RC3H2Q9HBD1 1191 aaKnown RBP11.07□□□□□ -0.64
HDAC4-210ENST00000493582 CYSLTR2Q9NS75 346 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 MBD1Q9UIS9 605 aaPredicted RBP11.07□□□□□ -0.64
HDAC4-210ENST00000493582 KCND3Q9UK17 655 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 ASB4Q9Y574 426 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 NUBP2Q9Y5Y2 271 aa11.07□□□□□ -0.64
HDAC4-210ENST00000493582 GREB1Q4ZG55 1949 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 TMEM129A0AVI4 362 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 NPIPB8E9PQR5 432 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 CASC3O15234 703 aaKnown RBP11.06□□□□□ -0.64
HDAC4-210ENST00000493582 PTP4A3O75365 173 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 APOC3P02656 99 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 HLA-DPB1P04440 258 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 F8A1P23610 371 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 ACRV1P26436 265 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 SOAT1P35610 550 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 PITPNBP48739 271 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 RPS7P62081 194 aaKnown RBP11.06□□□□□ -0.64
HDAC4-210ENST00000493582 DSG2Q14126 1118 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 CHRNA6Q15825 494 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 ZNF792Q3KQV3 632 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 ARMC12Q5T9G4 340 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 RETSATQ6NUM9 610 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 WASH2PQ6VEQ5 465 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 RASGRP3Q8IV61 690 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 VRK3Q8IV63 474 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 LINC00469Q8N7U9 141 aa11.06□□□□□ -0.64
HDAC4-210ENST00000493582 GTF3C2Q8WUA4 911 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-210ENST00000493582 RADILQ96JH8 1075 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms