RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	LYAR	Q9NX58	379 aa	Known RBP	12.46	□□□□□ -0.41
SAMM50-204	ENST00000493161	ADGRE2	Q9UHX3	823 aa		12.46	□□□□□ -0.41
SAMM50-204	ENST00000493161	SNX24	Q9Y343	169 aa		12.46	□□□□□ -0.41
SAMM50-204	ENST00000493161	EXPH5	Q8NEV8	1989 aa		12.46	□□□□□ -0.41
SAMM50-204	ENST00000493161	TCRBV9S1A1T	A0A576	114 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	EFCAB8	A8MWE9	144 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	ICOSLG	O75144	302 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	RCBTB2	O95199	551 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	ACTL6A	O96019	429 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	CPN1	P15169	458 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	PTX3	P26022	381 aa	Predicted RBP	12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	CPA2	P48052	419 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	PIK3CG	P48736	1102 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	CPSF6	Q16630	551 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	CYP20A1	Q6UW02	462 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	P3H2	Q8IVL5	708 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	WDSUB1	Q8N9V3	476 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	SMPDL3B	Q92485	455 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	CENPK	Q9BS16	269 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	SFXN3	Q9BWM7	321 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	METTL7A	Q9H8H3	244 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	EHD3	Q9NZN3	535 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	TXNDC16	Q9P2K2	825 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	FETUB	Q9UGM5	382 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	MAPRE3	Q9UPY8	281 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	RNF11	Q9Y3C5	154 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	TSC22D4	Q9Y3Q8	395 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	TESMIN	Q9Y4I5	508 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	WIF1	Q9Y5W5	379 aa		12.45	□□□□□ -0.42
SAMM50-204	ENST00000493161	JMJD1C	Q15652	2540 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	TRIM64	A6NGJ6	449 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	TRIM64B	A6NI03	449 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	FAM159B	A6NKW6	160 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161		A8MXE2	369 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161		H0Y3Z8	333 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	SNPH	O15079	494 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	ARHGEF9	O43307	516 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	SMPD2	O60906	423 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	KERA	O60938	352 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	PPM1B	O75688	479 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	TNFSF13	O75888	250 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	CNTF	P26441	200 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	PIK3R1	P27986	724 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	GP5	P40197	560 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	TMED10	P49755	219 aa	Known RBP	12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	ARFIP1	P53367	373 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	NRG3	P56975	720 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	GPX6	P59796	221 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	FAM27E3	Q08E93	113 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	MGAT2	Q10469	447 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	CBLB	Q13191	982 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	OR52E8	Q6IFG1	317 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	FAM111B	Q6SJ93	734 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	RAPH1	Q70E73	1250 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	CREG2	Q8IUH2	290 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	TRIM42	Q8IWZ5	723 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	WDR20	Q8TBZ3	569 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	PYROXD1	Q8WU10	500 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	WNT2B	Q93097	391 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	NXNL1	Q96CM4	212 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	PIGQ	Q9BRB3	760 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	ACTR8	Q9H981	624 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	SAYSD1	Q9NPB0	183 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	RYDEN	Q9NUL5	291 aa	Known RBP	12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	CLCF1	Q9UBD9	225 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	PCDHGA11	Q9Y5H2	935 aa		12.44	□□□□□ -0.42
SAMM50-204	ENST00000493161	FBN1	P35555	2871 aa	Known RBP	12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	DEFB108A	A8MXU0	73 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161		H0YIV9	168 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	CASK	O14936	926 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	UGT2B11	O75310	529 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	TGM6	O95932	706 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	LTA4H	P09960	611 aa	Known RBP	12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	CPM	P14384	443 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	KRT15	P19012	456 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	NT5E	P21589	574 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	CPOX	P36551	454 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	XK	P51811	444 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	GFRA1	P56159	465 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	RPP38	P78345	283 aa	Known RBP	12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	IRF9	Q00978	393 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	CUL3	Q13618	768 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	SLMAP	Q14BN4	828 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	EXOSC7	Q15024	291 aa	Known RBP	12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	LIPJ	Q5W064	366 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	FAM219B	Q5XKK7	198 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	NUDT13	Q86X67	352 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	C17orf47	Q8NEP4	570 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	OR4K14	Q8NGD5	310 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	OR14L1P	Q8NHC6	308 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	KCTD4	Q8WVF5	259 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	CDKL2	Q92772	493 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	CTHRC1	Q96CG8	243 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	OMA1	Q96E52	524 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	WFIKKN1	Q96NZ8	548 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	CDK15	Q96Q40	435 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	UCN2	Q96RP3	112 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	TM9SF2	Q99805	663 aa		12.43	□□□□□ -0.42
SAMM50-204	ENST00000493161	OSBPL11	Q9BXB4	747 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms