RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 RAB17Q9H0T7 212 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 C1orf21Q9H246 121 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 FAM124BQ9H5Z6 455 aaPredicted RBP3.17□□□□□ -1.9
CLK1-213ENST00000492793 ABCC13Q9NSE7 274 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 NINJ2Q9NZG7 142 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 RCOR3Q9P2K3 495 aaPredicted RBP3.17□□□□□ -1.9
CLK1-213ENST00000492793 MIOXQ9UGB7 285 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 SPATA2Q9UM82 520 aa3.17□□□□□ -1.9
CLK1-213ENST00000492793 RAD54L2Q9Y4B4 1467 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 TRIM49BA6NDI0 452 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 FOXI3A8MTJ6 420 aaPredicted RBP3.16□□□□□ -1.9
CLK1-213ENST00000492793 ARPC1BO15143 372 aaKnown RBP3.16□□□□□ -1.9
CLK1-213ENST00000492793 PDE5AO76074 875 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 SEMA4FO95754 770 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 GOT2P00505 430 aaKnown RBP3.16□□□□□ -1.9
CLK1-213ENST00000492793 HCKP08631 526 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 CCDC159P0C7I6 412 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 ZCCHC18P0CG32 403 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 GHRP10912 638 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 ACP1P24666 158 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 MAGEA4P43358 317 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 PGFP49763 221 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 MFAP2P55001 183 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 SRYQ05066 204 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 GAMTQ14353 236 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 ZKSCAN8Q15776 578 aaPredicted RBP3.16□□□□□ -1.9
CLK1-213ENST00000492793 HIGD2BQ4VC39 106 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 C14orf28Q4W4Y0 310 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 NHLRC3Q5JS37 347 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 FAM219BQ5XKK7 198 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 WDR25Q64LD2 544 aaPredicted RBP3.16□□□□□ -1.9
CLK1-213ENST00000492793 IRGCQ6NXR0 463 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 NEK5Q6P3R8 708 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 RFWD3Q6PCD5 774 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 TSEN54Q7Z6J9 526 aaKnown RBP3.16□□□□□ -1.9
CLK1-213ENST00000492793 HIPK1Q86Z02 1210 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 ARL14Q8N4G2 192 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 HDDC3Q8N4P3 179 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 ANKRD20A12PQ8NF67 263 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 ITLN1Q8WWA0 313 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 P3H4Q92791 437 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 LHX4Q969G2 390 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 TMEM186Q96B77 213 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 ANKRD9Q96BM1 317 aaPredicted RBP3.16□□□□□ -1.9
CLK1-213ENST00000492793 CAPNS2Q96L46 248 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 RPP25Q9BUL9 199 aaKnown RBP3.16□□□□□ -1.9
CLK1-213ENST00000492793 ATG10Q9H0Y0 220 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 CUTCQ9NTM9 273 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 EMCNQ9ULC0 261 aa3.16□□□□□ -1.9
CLK1-213ENST00000492793 A0A0A6YYD4 124 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 ZNF487B1APH4 448 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 H3BMH7 237 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 RASGRF2O14827 1237 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 OAS1P00973 400 aaKnown RBP3.15□□□□□ -1.91
CLK1-213ENST00000492793 CXCL10P02778 98 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 CYP11B1P15538 503 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 GATA1P15976 413 aaPredicted RBP3.15□□□□□ -1.91
CLK1-213ENST00000492793 ARF4P18085 180 aaPredicted RBP3.15□□□□□ -1.91
CLK1-213ENST00000492793 IL4RP24394 825 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 PRDX2P32119 198 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 SAA4P35542 130 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 ARHGDIAP52565 204 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 STARD6P59095 220 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 IL1RL1Q01638 556 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 PCK2Q16822 640 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 SLC22A6Q4U2R8 563 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 PARP10Q53GL7 1025 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 VWA2Q5GFL6 755 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 BEND6Q5SZJ8 279 aaPredicted RBP3.15□□□□□ -1.91
CLK1-213ENST00000492793 RAET1GQ6H3X3 334 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 RHBDD2Q6NTF9 364 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 RBM43Q6ZSC3 357 aaKnown RBP3.15□□□□□ -1.91
CLK1-213ENST00000492793 ELMOD2Q8IZ81 293 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 SLC22A18ASQ8N1D0 253 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 SUMF1Q8NBK3 374 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 CSNK1G2-AS1Q8NCQ2 148 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 OR4F17Q8NGA8 305 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 RHOXF1Q8NHV9 184 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 TBCKQ8TEA7 893 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 OR4F4Q96R69 305 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 TSPAN18Q96SJ8 248 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 CPXM1Q96SM3 734 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 GPR174Q9BXC1 333 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 ESM1Q9NQ30 184 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 GDAP2Q9NXN4 497 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 CNOT2Q9NZN8 540 aaKnown RBP3.15□□□□□ -1.91
CLK1-213ENST00000492793 ARMCX1Q9P291 453 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 CIDEBQ9UHD4 219 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 IL20RAQ9UHF4 553 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 PIN4Q9Y237 131 aaKnown RBP3.15□□□□□ -1.91
CLK1-213ENST00000492793 KLHDC2Q9Y2U9 406 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 FAM205AQ6ZU69 1335 aa3.15□□□□□ -1.91
CLK1-213ENST00000492793 ABCA7Q8IZY2 2146 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 A0A1W2PPR1 153 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 LGALS8O00214 317 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 ADAM12O43184 909 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 PRPSAP2O60256 369 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 ECDO95905 644 aaPredicted RBP3.14□□□□□ -1.91
CLK1-213ENST00000492793 RENP00797 406 aa3.14□□□□□ -1.91
CLK1-213ENST00000492793 PDGFBP01127 241 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms