RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 IL2RAP01589 272 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 CLPSP04118 112 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 RPS17P08708 135 aaKnown RBP8.03□□□□□ -1.12
NUP50-217ENST00000491860 ABHD2P08910 425 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 DRD2P14416 443 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 ABCD3P28288 659 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 SSTR4P31391 388 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 ASCL1P50553 236 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 EEF1A1P68104 462 aaKnown RBP8.03□□□□□ -1.12
NUP50-217ENST00000491860 MRPS22P82650 360 aaKnown RBP8.03□□□□□ -1.12
NUP50-217ENST00000491860 CSTF3Q12996 717 aaKnown RBP8.03□□□□□ -1.12
NUP50-217ENST00000491860 EEF1A1P5Q5VTE0 462 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 SLC30A6Q6NXT4 461 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 ARSKQ6UWY0 536 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 TIFABQ6ZNK6 161 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 DGAT2L6Q6ZPD8 337 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 TRMT10CQ7L0Y3 403 aaKnown RBP8.03□□□□□ -1.12
NUP50-217ENST00000491860 NUP54Q7Z3B4 507 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 COMMD6Q7Z4G1 85 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 TMEM200AQ86VY9 491 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 CCDC71Q8IV32 467 aaPredicted RBP8.03□□□□□ -1.12
NUP50-217ENST00000491860 ZNF615Q8N8J6 731 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 ZNF483Q8TF39 744 aaPredicted RBP8.03□□□□□ -1.12
NUP50-217ENST00000491860 IFT81Q8WYA0 676 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 NINJ1Q92982 152 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 ADIPOR1Q96A54 375 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 LCORQ96JN0 433 aaPredicted RBP8.03□□□□□ -1.12
NUP50-217ENST00000491860 RILPQ96NA2 401 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 CDK15Q96Q40 435 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 UCK2Q9BZX2 261 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 METTL7AQ9H8H3 244 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 SEMA4BQ9NPR2 832 aaPredicted RBP8.03□□□□□ -1.12
NUP50-217ENST00000491860 NPDC1Q9NQX5 325 aaPredicted RBP8.03□□□□□ -1.12
NUP50-217ENST00000491860 GIMAP4Q9NUV9 329 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 ALKBH4Q9NXW9 302 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 Q9UFV3 132 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 FETUBQ9UGM5 382 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 SLC12A4Q9UP95 1085 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 C15orf41Q9Y2V0 281 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 FREM3P0C091 2139 aa8.03□□□□□ -1.12
NUP50-217ENST00000491860 SPG11Q96JI7 2443 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 CD8B2A6NJW9 211 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 TRIM49D1C9J1S8 452 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 POC1B-GALNT4F8VUJ3 575 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 SYT5O00445 386 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 PGRMC2O15173 223 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 ULK1O75385 1050 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 PRKRAO75569 313 aaKnown RBP8.02□□□□□ -1.13
NUP50-217ENST00000491860 PPM1BO75688 479 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 TRAPPC6AO75865 159 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 SLITRK5O94991 958 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 PDYNP01213 254 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 ENO1P06733 434 aaKnown RBP8.02□□□□□ -1.13
NUP50-217ENST00000491860 GSTA1P08263 222 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 CELA3AP09093 270 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 ENDOUP21128 410 aaKnown RBP8.02□□□□□ -1.13
NUP50-217ENST00000491860 GPX3P22352 226 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 CASP3P42574 277 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 CDK9P50750 372 aaKnown RBP8.02□□□□□ -1.13
NUP50-217ENST00000491860 KRTAP10-9P60411 292 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 CLCQ05315 142 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 PLCXD2Q0VAA5 305 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 DUSP8Q13202 625 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 RCAN2Q14206 197 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 HEPACAMQ14CZ8 416 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 PRICKLE4Q2TBC4 344 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 FBXL19-AS1Q494R0 122 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 SPIN4Q56A73 249 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 TIGD3Q6B0B8 471 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 VASNQ6EMK4 673 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 RTL6Q6ICC9 239 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 ENPP6Q6UWR7 440 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 WDR53Q7Z5U6 358 aaPredicted RBP8.02□□□□□ -1.13
NUP50-217ENST00000491860 KIF18BQ86Y91 864 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 PLD6Q8N2A8 252 aaKnown RBP8.02□□□□□ -1.13
NUP50-217ENST00000491860 RPRMLQ8N4K4 120 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 OR1J4Q8NGS1 313 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 ZNF675Q8TD23 568 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 ACMSDQ8TDX5 336 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 DCAKDQ8WVC6 231 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 SREK1Q8WXA9 508 aaKnown RBP8.02□□□□□ -1.13
NUP50-217ENST00000491860 KLHL29Q96CT2 875 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 TMCO6Q96DC7 493 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 CCDC126Q96EE4 140 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 C16orf45Q96MC5 204 aaPredicted RBP8.02□□□□□ -1.13
NUP50-217ENST00000491860 ZFP3Q96NJ6 502 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 ZNF382Q96SR6 550 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 MRPL1Q9BYD6 325 aaKnown RBP8.02□□□□□ -1.13
NUP50-217ENST00000491860 BRINP2Q9C0B6 783 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 PRDM14Q9GZV8 571 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 STMN4Q9H169 189 aaPredicted RBP8.02□□□□□ -1.13
NUP50-217ENST00000491860 UBQLN3Q9H347 655 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 ACBD3Q9H3P7 528 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 CALHM2Q9HA72 323 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 PROK2Q9HC23 129 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 ZBTB26Q9HCK0 441 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 HHATLQ9HCP6 504 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 TEX10Q9NXF1 929 aaPredicted RBP8.02□□□□□ -1.13
NUP50-217ENST00000491860 SPRR3Q9UBC9 169 aa8.02□□□□□ -1.13
NUP50-217ENST00000491860 BCAP29Q9UHQ4 241 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms