RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 SERTM1A2A2V5 107 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 A8MVJ9 347 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 TFECO14948 347 aaPredicted RBP11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 HDAC3O15379 428 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 GLSO94925 669 aaPredicted RBP11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 SEMA3DO95025 777 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 CCL3P10147 92 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 NR2F6P10588 404 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 ALOX15P16050 662 aaPredicted RBP11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 FOXO1Q12778 655 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 MPEG1Q2M385 716 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 ZNF791Q3KP31 576 aaPredicted RBP11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 UGT3A2Q3SY77 523 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 GALNTL6Q49A17 601 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 ATP6AP1LQ52LC2 224 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 SPIN4Q56A73 249 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 PIGGQ5H8A4 983 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 NUDT13Q86X67 352 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 ST13P4Q8IZP2 240 aaPredicted RBP11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 MARVELD2Q8N4S9 558 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 TUBGCP3Q96CW5 907 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 DGAT2Q96PD7 388 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 TUBB1Q9H4B7 451 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 LRTM1Q9HBL6 345 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 HPF1Q9NWY4 346 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 LYARQ9NX58 379 aaKnown RBP11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 SUCOQ9UBS9 1254 aaKnown RBP11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 KLF2Q9Y5W3 355 aaPredicted RBP11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 PTGDR2Q9Y5Y4 395 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 DNAJC13O75165 2243 aa11.72□□□□□ -0.53
SEC61A1-206ENST00000491668 ATP6AP2A0A1C7CYW4 349 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 GNG14A0A1W2PPG7 69 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 FAM166BA8MTA8 275 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 C19orf84I3L1E1 186 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 EDF1O60869 148 aaKnown RBP11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 DIAPH2O60879 1101 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 PEX11AO75192 247 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 ATP6AP2O75787 350 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 RSL1D1O76021 490 aaKnown RBP11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 PDE9AO76083 593 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 KLK1P06870 262 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 TROVE2P10155 538 aaKnown RBP eCLIP11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 ABOP16442 354 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 TLX1P31314 330 aaPredicted RBP11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 SLC37A1P57057 533 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 ERVK-8P63133 956 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 PLIN5Q00G26 463 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 ZNF630Q2M218 657 aaPredicted RBP11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 SPRED3Q2MJR0 410 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 EMC4Q5J8M3 183 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 CCNYL2Q5T2Q4 361 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 NXNQ6DKJ4 435 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 MTFR2Q6P444 385 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 RPTNQ6XPR3 784 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 BNC2Q6ZN30 1099 aaPredicted RBP11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 RTL4Q6ZR62 310 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 RNF165Q6ZSG1 346 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 COMMD6Q7Z4G1 85 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 TICAM1Q8IUC6 712 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 LURAP1LQ8IV03 231 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 MMP21Q8N119 569 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 SLC34A3Q8N130 599 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 C1orf52Q8N6N3 182 aaKnown RBP11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 OR5L2Q8NGL0 311 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 NUBPLQ8TB37 319 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 MARVELD3Q96A59 401 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 RBM18Q96H35 190 aaKnown RBP11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 PPP3R2Q96LZ3 170 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 TTTY12Q9BZ98 90 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 DEFB127Q9H1M4 99 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 CCDC134Q9H6E4 229 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 ZDHHC11Q9H8X9 412 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 PROK2Q9HC23 129 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 C1orf109Q9NX04 203 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 COPS7AQ9UBW8 275 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 ERVK-19Q9WJR5 959 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 USH1CQ9Y6N9 552 aa11.71□□□□□ -0.53
SEC61A1-206ENST00000491668 PCDH7O60245 1069 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 GUCY1B2O75343 617 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 CELA3AP09093 270 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 CT62P0C5K7 136 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 SLC35E2P0CK97 266 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 COX7A2P14406 83 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 CNR1P21554 472 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 MAPK1P28482 360 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 HTR1EP28566 365 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 PTGS2P35354 604 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 SOX18P35713 384 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 BUD31P41223 144 aaPredicted RBP11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 DNASE1L1P49184 302 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 MAPK12P53778 367 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 CASP6P55212 293 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 PPIAP62937 165 aaKnown RBP11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 RPL38P63173 70 aaKnown RBP11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 GNGT1P63211 74 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 TBL3Q12788 808 aaKnown RBP11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 BIKQ13323 160 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 ZNF267Q14586 743 aaPredicted RBP11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 XKRXQ6PP77 449 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 METTL4Q8N3J2 472 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms