RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 SLITRK5O94991 958 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 GPX3P22352 226 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 RPL3P39023 403 aaKnown RBP15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 PTGR1Q14914 329 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ZNF385BQ569K4 471 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 GALNTL5Q7Z4T8 443 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ATCAYQ86WG3 371 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 LRRC34Q8IZ02 419 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 TAGAPQ8N103 731 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 BCORP1Q8N888 145 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 FAM98AQ8NCA5 519 aaKnown RBP15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 SIMC1Q8NDZ2 872 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 C17orf47Q8NEP4 570 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 LRRC8CQ8TDW0 803 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ADIPOR1Q96A54 375 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 AMDHD1Q96NU7 426 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 TAAR6Q96RI8 345 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 BARD1Q99728 777 aaKnown RBP15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 TIMMDC1Q9NPL8 285 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 INTS9Q9NV88 658 aaKnown RBP15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 PRODH2Q9UF12 536 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ATP6V1HQ9UI12 483 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 DTX4Q9Y2E6 619 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 KLF13Q9Y2Y9 288 aaPredicted RBP15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ZNF462Q96JM2 2506 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 TRPC5OSA6NMA1 111 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 SDHDO14521 159 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 PLOD3O60568 738 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 G6PDP11413 515 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 LBPP18428 481 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 EMDP50402 254 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 NR0B1P51843 470 aaKnown RBP15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 PMP22Q01453 160 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 TMEM107Q6UX40 140 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 LYPD8Q6UX82 237 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 RTL4Q6ZR62 310 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 MDGA2Q7Z553 956 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 WDR75Q8IWA0 830 aaKnown RBP15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 DND1Q8IYX4 353 aaKnown RBP15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 GALNT11Q8NCW6 608 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 OR7G2Q8NG99 324 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ZFP28Q8NHY6 868 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 FAR1Q8WVX9 515 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 CIDECQ96AQ7 238 aaPredicted RBP15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 SPACA9Q96E40 222 aaPredicted RBP15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ZBED6CLQ96FA7 236 aaPredicted RBP15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ITPAQ9BY32 194 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ANKRA2Q9H9E1 313 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 VPS4AQ9UN37 437 aa15.04■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 A0A087WV62 115 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 PLOD2O00469 737 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 COQ9O75208 318 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 WISP1O95388 367 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 CRYABP02511 175 aaKnown RBP15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 FBXO45P0C2W1 286 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 PRPS1L1P21108 318 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 MC3RP41968 323 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 FRKP42685 505 aaPredicted RBP15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 NRG3P56975 720 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 HSPB3Q12988 150 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ZNF791Q3KP31 576 aaPredicted RBP15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 FHL5Q5TD97 284 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 LARP4Q71RC2 724 aaKnown RBP eCLIP15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 GOLM1Q8NBJ4 401 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 PSD4Q8NDX1 1056 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 OR7A2PQ8NGA2 310 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 DNAJB8Q8NHS0 232 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 PIWIL2Q8TC59 973 aaKnown RBP15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 SGCZQ96LD1 299 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 C7orf26Q96N11 449 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 OLAHQ9NV23 265 aa15.03■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 CROCCQ5TZA2 2017 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ASPDHA6ND91 283 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 KLRC4-KLRK1H3BQV0 150 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 IFI6P09912 130 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 GPC1P35052 558 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 MEOX1P50221 254 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 DIO3P55073 304 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 MANFP55145 182 aaKnown RBP15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 CLDN8P56748 225 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 C21orf58P58505 322 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 DCAF7P61962 342 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 NNATQ16517 81 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ZNF324BQ6AW86 544 aaPredicted RBP15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 OGFOD2Q6N063 350 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ZNF551Q7Z340 670 aaPredicted RBP15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 SULF2Q8IWU5 870 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 KRTCAP2Q8N6L1 136 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 NR4A3Q92570 626 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ELP4Q96EB1 424 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 LCORQ96JN0 433 aaPredicted RBP15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 FRMD6Q96NE9 622 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 PRPF18Q99633 342 aaKnown RBP15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 NXF5Q9H1B4 397 aaKnown RBP15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 FOLH1BQ9HBA9 442 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ACSS1Q9NUB1 689 aaPredicted RBP15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ATAD3AQ9NVI7 634 aa15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 DDX18Q9NVP1 670 aaKnown RBP15.02■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 TAS2R9Q9NYW1 312 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms