RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 GPATCH2Q9NW75 528 aa20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 CMTM6Q9NX76 183 aa20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 ADA2Q9NZK5 511 aa20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 TMEM181Q9P2C4 612 aa20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 C19orf25Q9UFG5 118 aaPredicted RBP20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 ZNF639Q9UID6 485 aa20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 ERVK-19Q9WJR5 959 aa20.28■□□□□ 0.84
VCPKMT-204ENST00000491402 URB1O60287 2271 aaKnown RBP20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 TPRP12270 2363 aaKnown RBP20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 IGHV3-20A0A0C4DH32 117 aa20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 EVPLLA8MZ36 301 aa20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 HRKO00198 91 aa20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 NME4O00746 187 aa20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 DYRK3O43781 588 aa20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 KRT75O95678 551 aa20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 S1PR1P21453 382 aa20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 PPIBP23284 216 aaKnown RBP20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 PRKAG1P54619 331 aa20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 C6orf120Q7Z4R8 191 aa20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 CPEB2Q7Z5Q1 589 aaKnown RBP20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 NUP43Q8NFH3 380 aa20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 DAZLQ92904 295 aaKnown RBP20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 C8orf44Q96CB5 159 aa20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 THTPAQ9BU02 230 aa20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 CNPPD1Q9BV87 410 aa20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 C19orf53Q9UNZ5 99 aaPredicted RBP20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 L3MBTL1Q9Y468 752 aa20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 ANKRD11Q6UB99 2663 aaPredicted RBP20.27■□□□□ 0.84
VCPKMT-204ENST00000491402 GSC2O15499 205 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 CBX7O95931 251 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 MVDP53602 400 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 VAC14Q08AM6 782 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 FUT7Q11130 342 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 EXOSC7Q15024 291 aaKnown RBP20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 RNF130Q86XS8 419 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 ZNF248Q8NDW4 579 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 OR14A16Q8NHC5 309 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 SNIP1Q8TAD8 396 aaKnown RBP20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 FBXL20Q96IG2 436 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 MS4A4EQ96PG1 132 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 KAT8Q9H7Z6 458 aaKnown RBP20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 KCND3Q9UK17 655 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 PRPF19Q9UMS4 504 aaKnown RBP20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 CORO2BQ9UQ03 480 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 HS3ST3B1Q9Y662 390 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 ACACBO00763 2458 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 PCDH17O14917 1159 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 PSMG1O95456 288 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 HMGN2P05204 90 aaKnown RBP20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 GPX2P18283 190 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 MMP11P24347 488 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 SSTR4P31391 388 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 CASP9P55211 416 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 FOXK2Q01167 660 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 CLN3Q13286 438 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 C10orf111Q8N326 155 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 KCNE4Q8WWG9 221 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 MCUR1Q96AQ8 359 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 GIMAP5Q96F15 307 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 SENP5Q96HI0 755 aaPredicted RBP20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 EQTNQ9NQ60 294 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 PACSIN3Q9UKS6 424 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 PCDHGA6Q9Y5G7 932 aa20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.26■□□□□ 0.83
VCPKMT-204ENST00000491402 LOC102723996A0A087X1L8 192 aa20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 DDAH2O95865 285 aa20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 IGHEP01854 428 aa20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 RPS26P62854 115 aaKnown RBP20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 SSPNQ14714 243 aa20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 LASP1Q14847 261 aaKnown RBP20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 RGNQ15493 299 aa20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 COX20Q5RI15 118 aa20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 OR52R1Q8NGF1 315 aa20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 OR52N2Q8NGI0 321 aa20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 SLC2A12Q8TD20 617 aa20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 ECSITQ9BQ95 431 aa20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 WDR77Q9BQA1 342 aaPredicted RBP20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 OR8D2Q9GZM6 311 aa20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 ZFHX4Q86UP3 3567 aa20.25■□□□□ 0.83
VCPKMT-204ENST00000491402 SAGE2PA6NJ88 616 aa20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 NME6O75414 186 aaPredicted RBP20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 PGM1P36871 562 aa20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 DUSP8Q13202 625 aa20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 SAMD4BQ5PRF9 694 aaKnown RBP20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 PAPD4Q6PIY7 484 aaKnown RBP20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 VASH2Q86V25 355 aa20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 ARHGAP24Q8N264 748 aa20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 RNF148Q8N7C7 305 aa20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 OR10A6Q8NH74 314 aa20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 CLPTM1LQ96KA5 538 aa20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 SLC35G5Q96KT7 338 aa20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 LPAR4Q99677 370 aa20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 GPN2Q9H9Y4 310 aaPredicted RBP20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 BCAP29Q9UHQ4 241 aa20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 MRPS18BQ9Y676 258 aaKnown RBP20.24■□□□□ 0.83
VCPKMT-204ENST00000491402 PRORSD1PA6NEY8 169 aa20.23■□□□□ 0.83
VCPKMT-204ENST00000491402 COQ9O75208 318 aa20.23■□□□□ 0.83
VCPKMT-204ENST00000491402 CLPSP04118 112 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms