RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 BCL2L15Q5TBC7 163 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 UNC5DQ6UXZ4 953 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 ZNF783Q6ZMS7 281 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 KCTD20Q7Z5Y7 419 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 KIF18BQ86Y91 864 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 SPG21Q9NZD8 308 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 ASB4Q9Y574 426 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 CEP290O15078 2479 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 FURINP09958 794 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 DGKGP49619 791 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 ATP12AP54707 1039 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 NAE1Q13564 534 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 PLEKHS1Q5SXH7 462 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 MZT2AQ6P582 158 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 SERPINA13PQ6UXR4 307 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 SLC30A8Q8IWU4 369 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 GPR32P1Q8NGA4 272 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 AIFM2Q9BRQ8 373 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 HDHD2Q9H0R4 259 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 ZNF222Q9UK12 451 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 YIPF1Q9Y548 306 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 ANAPC1Q9H1A4 1944 aa18.3■□□□□ 0.52
SNAPC3-206ENST00000490969 IGLV3-16A0A075B6K0 115 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 ZNF840PA6NDX5 716 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 TALDO1P37837 337 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 KCNC3Q14003 757 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 PLA1AQ53H76 456 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 CRTC1Q6UUV9 634 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 DEF8Q6ZN54 512 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 RFLNAQ6ZTI6 216 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 CDH24Q86UP0 819 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 ZNF366Q8N895 744 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 GALNT11Q8NCW6 608 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 OR11H7Q8NGC8 314 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 OR11H4Q8NGC9 324 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 C2orf15Q8WU43 125 aaKnown RBP18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 TEFMQ96QE5 360 aaKnown RBP18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 OR4K3Q96R72 315 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 EMC7Q9NPA0 242 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 SEMA3GQ9NS98 782 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 ADAM30Q9UKF2 790 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 REV3LO60673 3130 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 KPNA5O15131 536 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 LZTS3O60299 673 aaPredicted RBP18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 TBL1XO60907 577 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 CSKP41240 450 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 PLD1Q13393 1074 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 GINS1Q14691 196 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 COL28A1Q2UY09 1125 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 ZNF655Q8N720 491 aaPredicted RBP18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 TOR1AIP2Q8NFQ8 470 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 FGF20Q9NP95 211 aaPredicted RBP18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 IL23AQ9NPF7 189 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 TAS2R7Q9NYW3 318 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 ZNF224Q9NZL3 707 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 OR51B4Q9Y5P0 310 aa18.29■□□□□ 0.52
SNAPC3-206ENST00000490969 SHISA3A0PJX4 238 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 ATF4P18848 351 aaPredicted RBP18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 PDE7AQ13946 482 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 AANATQ16613 207 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 DUSP6Q16828 381 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 HECTD3Q5T447 861 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 GPR139Q6DWJ6 353 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 ACSM5Q6NUN0 579 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 HDDC2Q7Z4H3 204 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 TMEM150AQ86TG1 271 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 RBM45Q8IUH3 476 aaKnown RBP18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 SLC7A13Q8TCU3 470 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 RNFT2Q96EX2 444 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 ASIC4Q96FT7 647 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 SLC22A12Q96S37 553 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 TMEM106CQ9BVX2 250 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 RSPO3Q9BXY4 272 aaPredicted RBP18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 RPS10-NUDT3A0A1W2PQS6 291 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 BET1O15155 118 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 PAHP00439 452 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 ACP2P11117 423 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 SYN1P17600 705 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 STOMP27105 288 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 CD79BP40259 229 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 CSTF1Q05048 431 aaKnown RBP18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 C2orf80Q0P641 193 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 RAB40BQ12829 278 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 AGTRAPQ6RW13 159 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 COMMD6Q7Z4G1 85 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 MARCH9Q86YJ5 346 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 FGF11Q92914 225 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 SORCS2Q96PQ0 1159 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 ARHGAP9Q9BRR9 750 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 PRR14Q9BWN1 585 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 BRD9Q9H8M2 597 aa18.28■□□□□ 0.52
SNAPC3-206ENST00000490969 A0A1W2PRB8 838 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 ARHGEF33A8MVX0 844 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 C5orf58C9J3I9 102 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 SH3BP5O60239 455 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 SLC19A2O60779 497 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 FGF18O76093 207 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 BCHEP06276 602 aa18.27■□□□□ 0.52
SNAPC3-206ENST00000490969 HLA-FP30511 346 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms