RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 B3GLCTQ6Y288 498 aa3.66□□□□□ -1.82
CCDC39-206ENST00000489868 TMCO5AQ8N6Q1 288 aa3.66□□□□□ -1.82
CCDC39-206ENST00000489868 ST7LQ8TDW4 575 aa3.66□□□□□ -1.82
CCDC39-206ENST00000489868 CFAP36Q96G28 342 aa3.66□□□□□ -1.82
CCDC39-206ENST00000489868 VSIG2Q96IQ7 327 aa3.66□□□□□ -1.82
CCDC39-206ENST00000489868 ACCSQ96QU6 501 aa3.66□□□□□ -1.82
CCDC39-206ENST00000489868 C19orf43Q9BQ61 176 aa3.66□□□□□ -1.82
CCDC39-206ENST00000489868 FAM173AQ9BQD7 235 aa3.66□□□□□ -1.82
CCDC39-206ENST00000489868 KCNMB3Q9NPA1 279 aa3.66□□□□□ -1.82
CCDC39-206ENST00000489868 ANAPC11Q9NYG5 84 aa3.66□□□□□ -1.82
CCDC39-206ENST00000489868 RAI14Q9P0K7 980 aa3.66□□□□□ -1.82
CCDC39-206ENST00000489868 NARFQ9UHQ1 456 aa3.66□□□□□ -1.82
CCDC39-206ENST00000489868 NPC1L1Q9UHC9 1359 aa3.65□□□□□ -1.82
CCDC39-206ENST00000489868 E7ENQ6 273 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 CYB561D2O14569 222 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 GJB5O95377 273 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 PRAMEF12O95522 483 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 NUDT14O95848 222 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 SFTPBP07988 381 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 P0C879 139 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 PVRP15151 417 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 ZBTB25P24278 435 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 CTNNA1P35221 906 aaKnown RBP3.65□□□□□ -1.83
CCDC39-206ENST00000489868 PITPNBP48739 271 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 CDKL1Q00532 357 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 TTC31Q49AM3 519 aaPredicted RBP3.65□□□□□ -1.83
CCDC39-206ENST00000489868 PAN3Q58A45 887 aaKnown RBP3.65□□□□□ -1.83
CCDC39-206ENST00000489868 RSBN1Q5VWQ0 802 aaPredicted RBP3.65□□□□□ -1.83
CCDC39-206ENST00000489868 ASRGL1Q7L266 308 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 UNC5CLQ8IV45 518 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 UBQLNLQ8IYU4 475 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 ATP6V1E2Q96A05 226 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 B3GALT6Q96L58 329 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 CPXM1Q96SM3 734 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 PIGVQ9NUD9 493 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 NYAP2Q9P242 653 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 MRPS2Q9Y399 296 aaKnown RBP3.65□□□□□ -1.83
CCDC39-206ENST00000489868 RNF115Q9Y4L5 304 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 SNX5Q9Y5X3 404 aa3.65□□□□□ -1.83
CCDC39-206ENST00000489868 PTPRUQ92729 1446 aa3.64□□□□□ -1.83
CCDC39-206ENST00000489868 COL16A1Q07092 1604 aaPredicted RBP3.64□□□□□ -1.83
CCDC39-206ENST00000489868 RANBP6O60518 1105 aaKnown RBP3.64□□□□□ -1.83
CCDC39-206ENST00000489868 RTN2O75298 545 aa3.64□□□□□ -1.83
CCDC39-206ENST00000489868 DUSP14O95147 198 aaKnown RBP3.64□□□□□ -1.83
CCDC39-206ENST00000489868 CXCL14O95715 111 aa3.64□□□□□ -1.83
CCDC39-206ENST00000489868 SNRPCP09234 159 aaKnown RBP3.64□□□□□ -1.83
CCDC39-206ENST00000489868 CASP3P42574 277 aa3.64□□□□□ -1.83
CCDC39-206ENST00000489868 ZKSCAN8Q15776 578 aaPredicted RBP3.64□□□□□ -1.83
CCDC39-206ENST00000489868 CLPPQ16740 277 aaPredicted RBP3.64□□□□□ -1.83
CCDC39-206ENST00000489868 C1QTNF12Q5T7M4 302 aa3.64□□□□□ -1.83
CCDC39-206ENST00000489868 PRAMEF7Q5VXH5 474 aa3.64□□□□□ -1.83
CCDC39-206ENST00000489868 MFSD7Q6UXD7 560 aa3.64□□□□□ -1.83
CCDC39-206ENST00000489868 STOX1Q6ZVD7 989 aa3.64□□□□□ -1.83
CCDC39-206ENST00000489868 FBXO16Q8IX29 292 aaPredicted RBP3.64□□□□□ -1.83
CCDC39-206ENST00000489868 GPR137CQ8N3F9 429 aa3.64□□□□□ -1.83
CCDC39-206ENST00000489868 TRIM9Q9C026 710 aa3.64□□□□□ -1.83
CCDC39-206ENST00000489868 ESM1Q9NQ30 184 aa3.64□□□□□ -1.83
CCDC39-206ENST00000489868 PLSCR3Q9NRY6 295 aa3.64□□□□□ -1.83
CCDC39-206ENST00000489868 CENPMQ9NSP4 180 aa3.64□□□□□ -1.83
CCDC39-206ENST00000489868 AKAP7Q9P0M2 348 aaPredicted RBP3.64□□□□□ -1.83
CCDC39-206ENST00000489868 VPS54Q9P1Q0 977 aa3.64□□□□□ -1.83
CCDC39-206ENST00000489868 SYNJ2O15056 1496 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 A8MX80 341 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 LRP3O75074 770 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 KRT6AP02538 564 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 KRT6BP04259 564 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 SERPINF2P08697 491 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 ALPIP09923 528 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 IGFBP5P24593 272 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 KRT6CP48668 564 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 POU3F4P49335 361 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 ARHGDIBP52566 201 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 NLRP11P59045 1033 aaKnown RBP3.63□□□□□ -1.83
CCDC39-206ENST00000489868 MORF4L2Q15014 288 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 ZNF544Q6NX49 715 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 Q8N9G6 341 aaPredicted RBP3.63□□□□□ -1.83
CCDC39-206ENST00000489868 ZNF564Q8TBZ8 553 aaPredicted RBP3.63□□□□□ -1.83
CCDC39-206ENST00000489868 STARD5Q9NSY2 213 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 SENP1Q9P0U3 644 aa3.63□□□□□ -1.83
CCDC39-206ENST00000489868 KLF2Q9Y5W3 355 aaPredicted RBP3.63□□□□□ -1.83
CCDC39-206ENST00000489868 CCDC69A6NI79 296 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.62□□□□□ -1.83
CCDC39-206ENST00000489868 TLR4O00206 839 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 EEF2KO00418 725 aaKnown RBP3.62□□□□□ -1.83
CCDC39-206ENST00000489868 GPAA1O43292 621 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 TYROBPO43914 113 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 PDE5AO76074 875 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 FERP16591 822 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 ACP1P24666 158 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 OR1D4P47884 311 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 NPRL3Q12980 569 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 HFEQ30201 348 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 ATRAIDQ6UW56 229 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 C2orf66Q6UXQ4 117 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 VASH2Q86V25 355 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 ZNF410Q86VK4 478 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 IQCA1Q86XH1 822 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 CHCHD4Q8N4Q1 142 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 OR4F17Q8NGA8 305 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 CASD1Q96PB1 797 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms