RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 DNAJA2O60884 412 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 S1PR1P21453 382 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 MMP11P24347 488 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 SOX18P35713 384 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 PRIM2P49643 509 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 FADDQ13158 208 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 SELPLGQ14242 412 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 EXOSC7Q15024 291 aaKnown RBP16.98■□□□□ 0.31
C9orf16-203ENST00000489240 RGNQ15493 299 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 TBC1D25Q3MII6 688 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 KIF2BQ8N4N8 673 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 PNPT1Q8TCS8 783 aaKnown RBP16.98■□□□□ 0.31
C9orf16-203ENST00000489240 DOK4Q8TEW6 326 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 SENP5Q96HI0 755 aaPredicted RBP16.98■□□□□ 0.31
C9orf16-203ENST00000489240 LPAR4Q99677 370 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 EFHD1Q9BUP0 239 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 TRIM8Q9BZR9 551 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 KAT8Q9H7Z6 458 aaKnown RBP16.98■□□□□ 0.31
C9orf16-203ENST00000489240 GPN2Q9H9Y4 310 aaPredicted RBP16.98■□□□□ 0.31
C9orf16-203ENST00000489240 BCAP29Q9UHQ4 241 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 FAF1Q9UNN5 650 aaPredicted RBP16.98■□□□□ 0.31
C9orf16-203ENST00000489240 WASF3Q9UPY6 502 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 ERVK-19Q9WJR5 959 aa16.98■□□□□ 0.31
C9orf16-203ENST00000489240 SAGE2PA6NJ88 616 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 PRAMEF2O60811 474 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 CBX7O95931 251 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 HMGN2P05204 90 aaKnown RBP16.97■□□□□ 0.31
C9orf16-203ENST00000489240 MATN1P21941 496 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 CRATP43155 626 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 KHKP50053 298 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 RPS18P62269 152 aaKnown RBP16.97■□□□□ 0.31
C9orf16-203ENST00000489240 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.97■□□□□ 0.31
C9orf16-203ENST00000489240 ZCCHC12Q6PEW1 402 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 PAPD4Q6PIY7 484 aaKnown RBP16.97■□□□□ 0.31
C9orf16-203ENST00000489240 GPR155Q7Z3F1 870 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 RNF130Q86XS8 419 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 MIPOL1Q8TD10 442 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 SLC2A12Q8TD20 617 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 RAB3IPQ96QF0 476 aaPredicted RBP16.97■□□□□ 0.31
C9orf16-203ENST00000489240 SPATA9Q9BWV2 254 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 OR8D2Q9GZM6 311 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 IKZF5Q9H5V7 419 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 ANKRA2Q9H9E1 313 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 GPATCH2Q9NW75 528 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 THUMPD1Q9NXG2 353 aaKnown RBP16.97■□□□□ 0.31
C9orf16-203ENST00000489240 COPS7AQ9UBW8 275 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 MSRB2Q9Y3D2 182 aa16.97■□□□□ 0.31
C9orf16-203ENST00000489240 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 PSMG1O95456 288 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 DDAH2O95865 285 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 F8A1P23610 371 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 SSTR4P31391 388 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 MVDP53602 400 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 LIPEQ05469 1076 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 LASP1Q14847 261 aaKnown RBP16.96■□□□□ 0.31
C9orf16-203ENST00000489240 PIGGQ5H8A4 983 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 FAM69BQ5VUD6 431 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 MFSD12Q6NUT3 480 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 SERPINA11Q86U17 422 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 RAB43Q86YS6 212 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 OR52R1Q8NGF1 315 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 OR10A6Q8NH74 314 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 ZNF721Q8TF20 911 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 GIMAP5Q96F15 307 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 TMEM121BQ9BXQ6 578 aaPredicted RBP16.96■□□□□ 0.31
C9orf16-203ENST00000489240 ACTRT3Q9BYD9 372 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 ZNF700Q9H0M5 742 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 OR10A5Q9H207 317 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 ALG2Q9H553 416 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 EQTNQ9NQ60 294 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 PRODH2Q9UF12 536 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 CD300AQ9UGN4 299 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 CFL2Q9Y281 166 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 HS3ST3B1Q9Y662 390 aa16.96■□□□□ 0.31
C9orf16-203ENST00000489240 IGHV3-20A0A0C4DH32 117 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 A0A1W2PQ72 361 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 CFAP73A6NFT4 308 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 TTC36A6NLP5 189 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 DUXAA6NLW8 204 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 HRKO00198 91 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 SOX30O94993 753 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 C1QCP02747 245 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 IGKV3-11P04433 115 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 HSD17B1P14061 328 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 SPINK2P20155 84 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 ME2P23368 584 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 OTX2P32243 289 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 GSK3BP49841 420 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 EEF1A2Q05639 463 aaKnown RBP16.95■□□□□ 0.3
C9orf16-203ENST00000489240 CEACAM7Q14002 265 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 ZNHIT3Q15649 155 aaPredicted RBP16.95■□□□□ 0.3
C9orf16-203ENST00000489240 CYP51A1Q16850 503 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 COX20Q5RI15 118 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 RNF111Q6ZNA4 994 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 CALHM3Q86XJ0 350 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 ULK2Q8IYT8 1036 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 FBXW8Q8N3Y1 598 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 ZNF615Q8N8J6 731 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 CDRT4Q8N9R6 151 aa16.95■□□□□ 0.3
C9orf16-203ENST00000489240 SIMC1Q8NDZ2 872 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms