RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 PLLPQ9Y342 182 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 NPFFR2Q9Y5X5 522 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 ZNF780BQ9Y6R6 833 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 PKDREJQ9NTG1 2253 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 FBN2P35556 2912 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 TLDC2A0PJX2 215 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 FAM90A27PA6NNH2 459 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 COPEO14579 308 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 CBX7O95931 251 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 IGHG3P01860 377 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 ATP1B1P05026 303 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 COX6B1P14854 86 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 KRT4P19013 534 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 AGAP20933 346 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 ENDOUP21128 410 aaKnown RBP12.87□□□□□ -0.35
VTI1A-206ENST00000489142 GDF1P27539 372 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 TIA1P31483 386 aaKnown RBP eCLIP12.87□□□□□ -0.35
VTI1A-206ENST00000489142 CRHR1P34998 444 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 KIR3DL1P43629 444 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 TRPC1P48995 793 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 MAN2A2P49641 1150 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 NUP107P57740 925 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 VSNL1P62760 191 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 PMPCAQ10713 525 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 SLC10A1Q14973 349 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 RPS6KA2Q15349 733 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 HYAL4Q2M3T9 481 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 GXYLT1Q4G148 440 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 SPIN4Q56A73 249 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 FRMD7Q6ZUT3 714 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 TDRPQ86YL5 185 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 CCDC71Q8IV32 467 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-206ENST00000489142 CCDC116Q8IYX3 515 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 EID3Q8N140 333 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 LRRC25Q8N386 305 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-206ENST00000489142 GBP7Q8N8V2 638 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-206ENST00000489142 EIF1ADQ8N9N8 165 aaKnown RBP12.87□□□□□ -0.35
VTI1A-206ENST00000489142 OR7G1Q8NGA0 311 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 OR52R1Q8NGF1 315 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 OR9A2Q8NGT5 310 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 CA5BP1Q8WTZ4 195 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 KAT2AQ92830 837 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 RILPQ96NA2 401 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 ZFP64Q9NPA5 681 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 CNIH4Q9P003 139 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.87□□□□□ -0.35
VTI1A-206ENST00000489142 BOKQ9UMX3 212 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-206ENST00000489142 STK38LQ9Y2H1 464 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 PTGDR2Q9Y5Y4 395 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 V9GYY5 206 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-206ENST00000489142 ABCA12Q86UK0 2595 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 DCHS2Q6V1P9 2916 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 ARHGAP21Q5T5U3 1957 aa12.87□□□□□ -0.35
VTI1A-206ENST00000489142 HCFC1P51610 2035 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 TRGV5A0A0B4J1U4 118 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 NKX2-6A6NCS4 301 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 CRCPO75575 148 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 CPA3P15088 417 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 ABCD3P28288 659 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 CCT5P48643 541 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 NRG3P56975 720 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 TRA2BP62995 288 aaKnown RBP12.86□□□□□ -0.35
VTI1A-206ENST00000489142 MAP4K2Q12851 820 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 PRSS53Q2L4Q9 553 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 CCDC153Q494R4 210 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 CFAP157Q5JU67 520 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 CLEC6AQ6EIG7 209 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 C10orf107Q8IVU9 208 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 DND1Q8IYX4 353 aaKnown RBP12.86□□□□□ -0.35
VTI1A-206ENST00000489142 SPPL2AQ8TCT8 520 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 TP53INP1Q96A56 240 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 CCDC126Q96EE4 140 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 ZNF597Q96LX8 424 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 UCK2Q9BZX2 261 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 CHST11Q9NPF2 352 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 ALKBH4Q9NXW9 302 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 COQ3Q9NZJ6 369 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 ZNF639Q9UID6 485 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 ACAD8Q9UKU7 415 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 PSME2Q9UL46 239 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 GRID1Q9ULK0 1009 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 RNF6Q9Y252 685 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 FIS1Q9Y3D6 152 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 POLR3HQ9Y535 204 aaPredicted RBP12.86□□□□□ -0.35
VTI1A-206ENST00000489142 APCP25054 2843 aa12.86□□□□□ -0.35
VTI1A-206ENST00000489142 ADGRG4Q8IZF6 3080 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 A0A1B0GVC2 190 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 CCDC151A5D8V7 595 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 C2orf72A6NCS6 295 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 CAPN14A8MX76 684 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 AQP7O14520 342 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 TP53I11O14683 189 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 TRIM3O75382 744 aaPredicted RBP12.85□□□□□ -0.35
VTI1A-206ENST00000489142 TRAPPC6AO75865 159 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 ANXA4P09525 319 aaPredicted RBP12.85□□□□□ -0.35
VTI1A-206ENST00000489142 ACVR2AP27037 513 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 MASP1P48740 699 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 EMDP50402 254 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 IMPG1Q17R60 797 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 ZNF628Q5EBL2 1059 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms