RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 VPS11Q9H270 941 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 ADAM29Q9UKF5 820 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 PCTPQ9UKL6 214 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 CAMK2AQ9UQM7 478 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 PLEKHA6Q9Y2H5 1048 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 ESYT3A0FGR9 886 aa16.83■□□□□ 0.28
HDAC6-231ENST00000488905 KLK1P06870 262 aa16.83■□□□□ 0.28
HDAC6-231ENST00000488905 KRT15P19012 456 aa16.83■□□□□ 0.28
HDAC6-231ENST00000488905 DNASE1P24855 282 aa16.83■□□□□ 0.28
HDAC6-231ENST00000488905 XKP51811 444 aa16.83■□□□□ 0.28
HDAC6-231ENST00000488905 TRAF3Q13114 568 aa16.83■□□□□ 0.28
HDAC6-231ENST00000488905 TOMM20Q15388 145 aa16.83■□□□□ 0.28
HDAC6-231ENST00000488905 NNATQ16517 81 aa16.83■□□□□ 0.28
HDAC6-231ENST00000488905 EIPR1Q53HC9 387 aa16.83■□□□□ 0.28
HDAC6-231ENST00000488905 C10orf62Q5T681 223 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-231ENST00000488905 TTC19Q6DKK2 380 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-231ENST00000488905 PLD6Q8N2A8 252 aaKnown RBP16.83■□□□□ 0.28
HDAC6-231ENST00000488905 GOT1L1Q8NHS2 421 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-231ENST00000488905 NTNG2Q96CW9 530 aa16.83■□□□□ 0.28
HDAC6-231ENST00000488905 PHF21BQ96EK2 531 aa16.83■□□□□ 0.28
HDAC6-231ENST00000488905 POM121Q96HA1 1249 aa16.83■□□□□ 0.28
HDAC6-231ENST00000488905 NTMT1Q9BV86 223 aa16.83■□□□□ 0.28
HDAC6-231ENST00000488905 UGT2B28Q9BY64 529 aa16.83■□□□□ 0.28
HDAC6-231ENST00000488905 NXF5Q9H1B4 397 aaKnown RBP16.83■□□□□ 0.28
HDAC6-231ENST00000488905 MBD3L4A6NDZ8 208 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-231ENST00000488905 MBD3L3A6NE82 208 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-231ENST00000488905 MBD3L5A6NJ08 208 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-231ENST00000488905 CD8B2A6NJW9 211 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 GNB5O14775 395 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 CDH16O75309 829 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 PPM1BO75688 479 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 PORP16435 677 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-231ENST00000488905 BMP7P18075 431 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 S1PR1P21453 382 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 PTPN6P29350 595 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 MAPK12P53778 367 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 PPP2R2AP63151 447 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 IFT88Q13099 833 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 GGTA1PQ4G0N0 100 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 WIPI1Q5MNZ9 446 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-231ENST00000488905 CCNYL2Q5T2Q4 361 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 TIGD3Q6B0B8 471 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 ZNF572Q7Z3I7 529 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-231ENST00000488905 MBD3L2Q8NHZ7 208 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-231ENST00000488905 WDYHV1Q96HA8 205 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 NSUN5Q96P11 429 aaKnown RBP16.82■□□□□ 0.28
HDAC6-231ENST00000488905 ALPK1Q96QP1 1244 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 TRIB1Q96RU8 372 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 ITPAQ9BY32 194 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 ACSS3Q9H6R3 686 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 METTL7AQ9H8H3 244 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 ZBTB26Q9HCK0 441 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 AHSPQ9NZD4 102 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 XPR1Q9UBH6 696 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 TMCO1Q9UM00 188 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 EDARQ9UNE0 448 aa16.82■□□□□ 0.28
HDAC6-231ENST00000488905 GOLGA6L10A6NI86 522 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 EEF1E1-BLOC1S5C9J1V9 151 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 STX16-NPEPL1H3BU86 382 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 STX16O14662 325 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 EEF1E1O43324 174 aaKnown RBP16.81■□□□□ 0.28
HDAC6-231ENST00000488905 ABCB1P08183 1280 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-231ENST00000488905 KLK2P20151 261 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 CASQ1P31415 396 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 PHBP35232 272 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 MAGEA12P43365 314 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 PRICKLE4Q2TBC4 344 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 UBAP2Q5T6F2 1119 aaKnown RBP16.81■□□□□ 0.28
HDAC6-231ENST00000488905 SLC48A1Q6P1K1 146 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 TMEM81Q6P7N7 255 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 ANGPTL8Q6UXH0 198 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 PAMR1Q6UXH9 720 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 COMMD6Q7Z4G1 85 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 METTL4Q8N3J2 472 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 FAM83FQ8NEG4 500 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-231ENST00000488905 OR1J4Q8NGS1 313 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 ABTB1Q969K4 478 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-231ENST00000488905 ISL2Q96A47 359 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 OSBPL11Q9BXB4 747 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 BRINP2Q9C0B6 783 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 ELOVL6Q9H5J4 265 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 ZDHHC18Q9NUE0 388 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 MAT2BQ9NZL9 334 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 CFL2Q9Y281 166 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 PCDHA9Q9Y5H5 950 aa16.81■□□□□ 0.28
HDAC6-231ENST00000488905 C1orf226A1L170 272 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 SNPHO15079 494 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 ATP1B1P05026 303 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 RBP1P09455 135 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 NAGAP17050 411 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 CTSSP25774 331 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 NAGLUP54802 743 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 SORDQ00796 357 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 SLC7A5Q01650 507 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 PLCXD2Q0VAA5 305 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 DAZAP2Q15038 168 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-231ENST00000488905 YRDCQ86U90 279 aaKnown RBP16.8■□□□□ 0.28
HDAC6-231ENST00000488905 KIF18BQ86Y91 864 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 MMP21Q8N119 569 aa16.8■□□□□ 0.28
HDAC6-231ENST00000488905 OR4F6Q8NGB9 312 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms