RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 OR4L1Q8NH43 312 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 ZNF671Q8TAW3 534 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 BCL2L2Q92843 193 aaPredicted RBP3.01□□□□□ -1.93
SSR1-209ENST00000488834 GLYATL1Q969I3 302 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 PPP1R16AQ96I34 528 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 C16orf45Q96MC5 204 aaPredicted RBP3.01□□□□□ -1.93
SSR1-209ENST00000488834 ATP6V0BQ99437 205 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 FUNDC2Q9BWH2 189 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 SLC26A1Q9H2B4 701 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 DCLRE1BQ9H816 532 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 RCOR3Q9P2K3 495 aaPredicted RBP3.01□□□□□ -1.93
SSR1-209ENST00000488834 CIDEBQ9UHD4 219 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 DUSP12Q9UNI6 340 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 SLC9A8Q9Y2E8 581 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 NISCHQ9Y2I1 1504 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 EEA1Q15075 1411 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 POGZQ7Z3K3 1410 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 HCFC1P51610 2035 aa3□□□□□ -1.93
SSR1-209ENST00000488834 AFF2P51816 1311 aa3□□□□□ -1.93
SSR1-209ENST00000488834 PRDM2Q13029 1718 aa3□□□□□ -1.93
SSR1-209ENST00000488834 SYNJ2BP-COX16A0A087WUM0 186 aa3□□□□□ -1.93
SSR1-209ENST00000488834 SYCE3A1L190 88 aa3□□□□□ -1.93
SSR1-209ENST00000488834 PRPSAP2O60256 369 aa3□□□□□ -1.93
SSR1-209ENST00000488834 NUDT14O95848 222 aa3□□□□□ -1.93
SSR1-209ENST00000488834 CCDC172P0C7W6 258 aa3□□□□□ -1.93
SSR1-209ENST00000488834 NSFP46459 744 aaKnown RBP3□□□□□ -1.93
SSR1-209ENST00000488834 MFAP2P55001 183 aa3□□□□□ -1.93
SSR1-209ENST00000488834 SLC12A3P55017 1021 aa3□□□□□ -1.93
SSR1-209ENST00000488834 UCP2P55851 309 aa3□□□□□ -1.93
SSR1-209ENST00000488834 CBX3Q13185 183 aa3□□□□□ -1.93
SSR1-209ENST00000488834 LASP1Q14847 261 aaKnown RBP3□□□□□ -1.93
SSR1-209ENST00000488834 PPP1R3AQ16821 1122 aa3□□□□□ -1.93
SSR1-209ENST00000488834 ANKDD1AQ495B1 522 aa3□□□□□ -1.93
SSR1-209ENST00000488834 KDELC1Q6UW63 502 aa3□□□□□ -1.93
SSR1-209ENST00000488834 B3GLCTQ6Y288 498 aa3□□□□□ -1.93
SSR1-209ENST00000488834 ITIH5Q86UX2 942 aa3□□□□□ -1.93
SSR1-209ENST00000488834 STHQ8IWL8 128 aa3□□□□□ -1.93
SSR1-209ENST00000488834 LINC00518Q8N0U6 118 aa3□□□□□ -1.93
SSR1-209ENST00000488834 SIDT2Q8NBJ9 832 aaKnown RBP3□□□□□ -1.93
SSR1-209ENST00000488834 RELL2Q8NC24 303 aaPredicted RBP3□□□□□ -1.93
SSR1-209ENST00000488834 ANKRD20A12PQ8NF67 263 aa3□□□□□ -1.93
SSR1-209ENST00000488834 OR4F5Q8NH21 305 aa3□□□□□ -1.93
SSR1-209ENST00000488834 OR4A16Q8NH70 328 aa3□□□□□ -1.93
SSR1-209ENST00000488834 FLVCR1-AS1Q8TAF5 88 aa3□□□□□ -1.93
SSR1-209ENST00000488834 MRAPQ8TCY5 172 aa3□□□□□ -1.93
SSR1-209ENST00000488834 ZNF606Q8WXB4 792 aa3□□□□□ -1.93
SSR1-209ENST00000488834 ITFG2Q969R8 447 aa3□□□□□ -1.93
SSR1-209ENST00000488834 RAB3CQ96E17 227 aa3□□□□□ -1.93
SSR1-209ENST00000488834 EPSTI1Q96J88 318 aa3□□□□□ -1.93
SSR1-209ENST00000488834 COG3Q96JB2 828 aa3□□□□□ -1.93
SSR1-209ENST00000488834 RPGRIP1Q96KN7 1286 aa3□□□□□ -1.93
SSR1-209ENST00000488834 CFAP53Q96M91 514 aa3□□□□□ -1.93
SSR1-209ENST00000488834 FAM210AQ96ND0 272 aa3□□□□□ -1.93
SSR1-209ENST00000488834 NAP1L3Q99457 506 aaPredicted RBP3□□□□□ -1.93
SSR1-209ENST00000488834 TEX13BQ9BXU2 312 aa3□□□□□ -1.93
SSR1-209ENST00000488834 C1orf21Q9H246 121 aa3□□□□□ -1.93
SSR1-209ENST00000488834 GANQ9H2C0 597 aa3□□□□□ -1.93
SSR1-209ENST00000488834 LIN28AQ9H9Z2 209 aaKnown RBP3□□□□□ -1.93
SSR1-209ENST00000488834 Q9HAA7 133 aa3□□□□□ -1.93
SSR1-209ENST00000488834 TIGARQ9NQ88 270 aa3□□□□□ -1.93
SSR1-209ENST00000488834 DDX28Q9NUL7 540 aaKnown RBP3□□□□□ -1.93
SSR1-209ENST00000488834 DNAJC11Q9NVH1 559 aa3□□□□□ -1.93
SSR1-209ENST00000488834 SENP1Q9P0U3 644 aa3□□□□□ -1.93
SSR1-209ENST00000488834 FOXA2Q9Y261 457 aaPredicted RBP3□□□□□ -1.93
SSR1-209ENST00000488834 AP1M2Q9Y6Q5 423 aa3□□□□□ -1.93
SSR1-209ENST00000488834 NCAPD3P42695 1498 aa3□□□□□ -1.93
SSR1-209ENST00000488834 KIAA1217Q5T5P2 1943 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 ZBED9Q6R2W3 1325 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 C5orf51A6NDU8 294 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 SLC28A1O00337 649 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 EEF2KO00418 725 aaKnown RBP2.99□□□□□ -1.93
SSR1-209ENST00000488834 E2F3O00716 465 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 PRAMEF12O95522 483 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 GOT2P00505 430 aaKnown RBP2.99□□□□□ -1.93
SSR1-209ENST00000488834 CCDC159P0C7I6 412 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 AREGP15514 252 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 UGT1A6P19224 532 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 CYP3A5P20815 502 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 MARCKSP29966 332 aaPredicted RBP2.99□□□□□ -1.93
SSR1-209ENST00000488834 MAGEA9P43362 315 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 ACADSBP45954 432 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 NT5C2P49902 561 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 GPC3P51654 580 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 TKTL1P51854 596 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 ARHGDIAP52565 204 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 LRRC74AQ0VAA2 488 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 PPP1R8Q12972 351 aaKnown RBP2.99□□□□□ -1.93
SSR1-209ENST00000488834 SLC10A1Q14973 349 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 LTB4RQ15722 352 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 C17orf58Q2M2W7 97 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 ACER2Q5QJU3 275 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 WDR25Q64LD2 544 aaPredicted RBP2.99□□□□□ -1.93
SSR1-209ENST00000488834 STEAP1BQ6NZ63 245 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 ASRGL1Q7L266 308 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 PPP1R42Q7Z4L9 355 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 LUZP1Q86V48 1076 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 PEX5LQ8IYB4 626 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 ZNF491Q8N8L2 437 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 LEMD2Q8NC56 503 aa2.99□□□□□ -1.93
SSR1-209ENST00000488834 ZBTB44Q8NCP5 570 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms