RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 SLC35C2Q9NQQ7 365 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 RYDENQ9NUL5 291 aaKnown RBP13.09□□□□□ -0.31
COL9A2-208ENST00000488463 TRAF6Q9Y4K3 522 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 APCP25054 2843 aa13.09□□□□□ -0.31
COL9A2-208ENST00000488463 MYO1GB0I1T2 1018 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 G3V3Y1 287 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 LSM1O15116 133 aaKnown RBP13.08□□□□□ -0.32
COL9A2-208ENST00000488463 HS6ST1O60243 411 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 SLC19A2O60779 497 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 CRCPO75575 148 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 PCSK2P16519 638 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 CNR1P21554 472 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 SERPINB5P36952 375 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 CA7P43166 264 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 MRPS35P82673 323 aaKnown RBP13.08□□□□□ -0.32
COL9A2-208ENST00000488463 HSF1Q00613 529 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 C2orf80Q0P641 193 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 IMPG1Q17R60 797 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 HYAL4Q2M3T9 481 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 RFTN2Q52LD8 501 aaPredicted RBP13.08□□□□□ -0.32
COL9A2-208ENST00000488463 XKR7Q5GH72 579 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 BEND6Q5SZJ8 279 aaPredicted RBP13.08□□□□□ -0.32
COL9A2-208ENST00000488463 CEP85LQ5SZL2 805 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 BNC2Q6ZN30 1099 aaPredicted RBP13.08□□□□□ -0.32
COL9A2-208ENST00000488463 CCDC116Q8IYX3 515 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 CLYBLQ8N0X4 340 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 OR10G3Q8NGC4 313 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 OR52N2Q8NGI0 321 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 OR9A2Q8NGT5 310 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 TWIST2Q8WVJ9 160 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 PKNOX2Q96KN3 472 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 BRINP2Q9C0B6 783 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 NXF5Q9H1B4 397 aaKnown RBP13.08□□□□□ -0.32
COL9A2-208ENST00000488463 ZDHHC11Q9H8X9 412 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 ANKRA2Q9H9E1 313 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 LRTM1Q9HBL6 345 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 C1orf109Q9NX04 203 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 ZDHHC2Q9UIJ5 367 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 CNOT11Q9UKZ1 510 aaKnown RBP13.08□□□□□ -0.32
COL9A2-208ENST00000488463 WBP11Q9Y2W2 641 aaKnown RBP13.08□□□□□ -0.32
COL9A2-208ENST00000488463 ACTL7BQ9Y614 415 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 ZNF780BQ9Y6R6 833 aa13.08□□□□□ -0.32
COL9A2-208ENST00000488463 SLC28A1O00337 649 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 PIP5K1BO14986 540 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 SEC22BO75396 215 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 NME6O75414 186 aaPredicted RBP13.07□□□□□ -0.32
COL9A2-208ENST00000488463 CLDN1O95832 211 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 LINC00032P0C843 101 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 NEFHP12036 1026 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 SDC1P18827 310 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 PIGAP37287 484 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 DNASE1L1P49184 302 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 C3AR1Q16581 482 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.07□□□□□ -0.32
COL9A2-208ENST00000488463 IKBIPQ70UQ0 350 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 FJX1Q86VR8 437 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 TICAM1Q8IUC6 712 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 SPPL2CQ8IUH8 684 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 LURAP1LQ8IV03 231 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 DND1Q8IYX4 353 aaKnown RBP13.07□□□□□ -0.32
COL9A2-208ENST00000488463 GHDCQ8N2G8 530 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 FBXW8Q8N3Y1 598 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 KAT2AQ92830 837 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 ERP27Q96DN0 273 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 ZNF764Q96H86 408 aaPredicted RBP13.07□□□□□ -0.32
COL9A2-208ENST00000488463 C3orf30Q96M34 536 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 FAM173AQ9BQD7 235 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 ITPAQ9BY32 194 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 TTTY12Q9BZ98 90 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 C20orf27Q9GZN8 174 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 ZNF395Q9H8N7 513 aaPredicted RBP13.07□□□□□ -0.32
COL9A2-208ENST00000488463 SACM1LQ9NTJ5 587 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 TUBA8Q9NY65 449 aaPredicted RBP13.07□□□□□ -0.32
COL9A2-208ENST00000488463 FIS1Q9Y3D6 152 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 NPFFR2Q9Y5X5 522 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 CACNA1CQ13936 2221 aa13.07□□□□□ -0.32
COL9A2-208ENST00000488463 A0A1B0GUH1 482 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 LRRC3CA6NJW4 275 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 ADAM10O14672 748 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 RGS14O43566 566 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 ITM2AO43736 263 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 PLOD3O60568 738 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 LYPLA1O75608 230 aaPredicted RBP13.06□□□□□ -0.32
COL9A2-208ENST00000488463 ABCD3P28288 659 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 FBXW4P57775 412 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 PPIAP62937 165 aaKnown RBP13.06□□□□□ -0.32
COL9A2-208ENST00000488463 SH2D4BQ5SQS7 431 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 SLC22A10Q63ZE4 541 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 NUDCD3Q8IVD9 361 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 SAMD14Q8IZD0 417 aaPredicted RBP13.06□□□□□ -0.32
COL9A2-208ENST00000488463 TAGAPQ8N103 731 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 OR7G2Q8NG99 324 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 OR52R1Q8NGF1 315 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 VSTM2LQ96N03 204 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 CCT7Q99832 543 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 ACBD3Q9H3P7 528 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 EML4Q9HC35 981 aaKnown RBP13.06□□□□□ -0.32
COL9A2-208ENST00000488463 GIMAP2Q9UG22 337 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 TINAGQ9UJW2 476 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 GPR55Q9Y2T6 319 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms