RNA–Protein interactions for RNA: ENST00000488443.1

UBAP2-211, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-211ENST00000488443 NODALQ96S42 347 aa12.13□□□□□ -0.47
UBAP2-211ENST00000488443 TUBA1CQ9BQE3 449 aa12.13□□□□□ -0.47
UBAP2-211ENST00000488443 ITPAQ9BY32 194 aa12.13□□□□□ -0.47
UBAP2-211ENST00000488443 ANGPTL4Q9BY76 406 aa12.13□□□□□ -0.47
UBAP2-211ENST00000488443 PRDM14Q9GZV8 571 aa12.13□□□□□ -0.47
UBAP2-211ENST00000488443 UBQLN3Q9H347 655 aa12.13□□□□□ -0.47
UBAP2-211ENST00000488443 ZNF395Q9H8N7 513 aaPredicted RBP12.13□□□□□ -0.47
UBAP2-211ENST00000488443 IPPKQ9H8X2 491 aa12.13□□□□□ -0.47
UBAP2-211ENST00000488443 NEUROD4Q9HD90 331 aa12.13□□□□□ -0.47
UBAP2-211ENST00000488443 GALNT8Q9NY28 637 aa12.13□□□□□ -0.47
UBAP2-211ENST00000488443 KLRF1Q9NZS2 232 aa12.13□□□□□ -0.47
UBAP2-211ENST00000488443 FOXD3Q9UJU5 478 aaPredicted RBP12.13□□□□□ -0.47
UBAP2-211ENST00000488443 ACOT9Q9Y305 439 aa12.13□□□□□ -0.47
UBAP2-211ENST00000488443 PCDHGB3Q9Y5G1 929 aa12.13□□□□□ -0.47
UBAP2-211ENST00000488443 SYCE1LA8MT33 242 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 NME6O75414 186 aaPredicted RBP12.12□□□□□ -0.47
UBAP2-211ENST00000488443 ERAL1O75616 437 aaKnown RBP12.12□□□□□ -0.47
UBAP2-211ENST00000488443 MTHFD2P13995 350 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 GPX3P22352 226 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 PTPN6P29350 595 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 OPRM1P35372 400 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 GCKP35557 465 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 FEN1P39748 380 aaKnown RBP12.12□□□□□ -0.47
UBAP2-211ENST00000488443 STARP49675 285 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 XKP51811 444 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 PLTPP55058 493 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 PLCXD2Q0VAA5 305 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 ILF2Q12905 390 aaKnown RBP12.12□□□□□ -0.47
UBAP2-211ENST00000488443 SF3B4Q15427 424 aaKnown RBP eCLIP12.12□□□□□ -0.471e-7■■■□□ 15.4
UBAP2-211ENST00000488443 LIPJQ5W064 366 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 TIGD3Q6B0B8 471 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 CLEC9AQ6UXN8 241 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 CENPLQ8N0S6 344 aaPredicted RBP12.12□□□□□ -0.47
UBAP2-211ENST00000488443 ZNF615Q8N8J6 731 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 SIMC1Q8NDZ2 872 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 OR4K14Q8NGD5 310 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 ADIPOR1Q96A54 375 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 TP53INP1Q96A56 240 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 MBD6Q96DN6 1003 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 OMA1Q96E52 524 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 TMEM41AQ96HV5 264 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 ERP44Q9BS26 406 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 OSBPL11Q9BXB4 747 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 MRPL1Q9BYD6 325 aaKnown RBP12.12□□□□□ -0.47
UBAP2-211ENST00000488443 NOL11Q9H8H0 719 aaKnown RBP12.12□□□□□ -0.47
UBAP2-211ENST00000488443 DDX31Q9H8H2 851 aaKnown RBP12.12□□□□□ -0.47
UBAP2-211ENST00000488443 PLEKHF2Q9H8W4 249 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 PFDN4Q9NQP4 134 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 GRHL1Q9NZI5 618 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 WHRNQ9P202 907 aa12.12□□□□□ -0.47
UBAP2-211ENST00000488443 HRNRQ86YZ3 2850 aaPredicted RBP12.12□□□□□ -0.47
UBAP2-211ENST00000488443 A0A1W2PPR1 153 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 SH3D21A4FU49 640 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 ANKRD33BA6NCL7 494 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 MBD3L4A6NDZ8 208 aaPredicted RBP12.11□□□□□ -0.47
UBAP2-211ENST00000488443 MBD3L3A6NE82 208 aaPredicted RBP12.11□□□□□ -0.47
UBAP2-211ENST00000488443 MBD3L5A6NJ08 208 aaPredicted RBP12.11□□□□□ -0.47
UBAP2-211ENST00000488443 CD8B2A6NJW9 211 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 H0YIV9 168 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 SNPHO15079 494 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 SMAD7O15105 426 aaKnown RBP12.11□□□□□ -0.47
UBAP2-211ENST00000488443 EIF3HO15372 352 aaKnown RBP eCLIP12.11□□□□□ -0.47
UBAP2-211ENST00000488443 SMNDC1O75940 238 aaKnown RBP eCLIP12.11□□□□□ -0.471e-63■□□□□ 10.7
UBAP2-211ENST00000488443 C2P06681 752 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 ABCB1P08183 1280 aaPredicted RBP12.11□□□□□ -0.47
UBAP2-211ENST00000488443 INHBBP09529 407 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 CPMP14384 443 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 STX2P32856 288 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 DEKP35659 375 aaKnown RBP12.11□□□□□ -0.47
UBAP2-211ENST00000488443 ALDH9A1P49189 494 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 NKX6-1P78426 367 aaPredicted RBP12.11□□□□□ -0.47
UBAP2-211ENST00000488443 TRADDQ15628 312 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 LTB4RQ15722 352 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 CCNYL2Q5T2Q4 361 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 RPS27LQ71UM5 84 aaKnown RBP12.11□□□□□ -0.47
UBAP2-211ENST00000488443 PTGR2Q8N8N7 351 aaPredicted RBP12.11□□□□□ -0.47
UBAP2-211ENST00000488443 OR52B6Q8NGF0 335 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 MBD3L2Q8NHZ7 208 aaPredicted RBP12.11□□□□□ -0.47
UBAP2-211ENST00000488443 PHF21BQ96EK2 531 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 C18orf12Q96KH6 178 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 VPS11Q9H270 941 aa12.11□□□□□ -0.47
UBAP2-211ENST00000488443 C6orf203Q9P0P8 240 aaPredicted RBP12.11□□□□□ -0.47
UBAP2-211ENST00000488443 ANKHD1Q8IWZ3 2542 aaKnown RBP12.11□□□□□ -0.47
UBAP2-211ENST00000488443 MED12LQ86YW9 2145 aa12.1□□□□□ -0.47
UBAP2-211ENST00000488443 A0A087X1B8 175 aa12.1□□□□□ -0.47
UBAP2-211ENST00000488443 OR7A17O14581 309 aa12.1□□□□□ -0.47
UBAP2-211ENST00000488443 CASKO14936 926 aa12.1□□□□□ -0.47
UBAP2-211ENST00000488443 ICOSLGO75144 302 aa12.1□□□□□ -0.47
UBAP2-211ENST00000488443 PPM1BO75688 479 aa12.1□□□□□ -0.47
UBAP2-211ENST00000488443 CLDN9O95484 217 aa12.1□□□□□ -0.47
UBAP2-211ENST00000488443 HRGP04196 525 aa12.1□□□□□ -0.47
UBAP2-211ENST00000488443 FOSL1P15407 271 aa12.1□□□□□ -0.47
UBAP2-211ENST00000488443 PORP16435 677 aaPredicted RBP12.1□□□□□ -0.47
UBAP2-211ENST00000488443 CD53P19397 219 aa12.1□□□□□ -0.47
UBAP2-211ENST00000488443 MAGEA4P43358 317 aa12.1□□□□□ -0.47
UBAP2-211ENST00000488443 CCNG1P51959 295 aa12.1□□□□□ -0.47
UBAP2-211ENST00000488443 MAPK12P53778 367 aa12.1□□□□□ -0.47
UBAP2-211ENST00000488443 ALDH18A1P54886 795 aaKnown RBP12.1□□□□□ -0.47
UBAP2-211ENST00000488443 FUT7Q11130 342 aa12.1□□□□□ -0.47
UBAP2-211ENST00000488443 CUL3Q13618 768 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms