RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CMPK2Q5EBM0 449 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 HERC4Q5GLZ8 1057 aaPredicted RBP4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 TOR1AIP1Q5JTV8 583 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 NKAIN2Q5VXU1 208 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 RTL6Q6ICC9 239 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 NEPROQ6NW34 567 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 C3P1Q6ZMU1 363 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 ZNF730Q6ZMV8 503 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 Q6ZTC4 211 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 TAF8Q7Z7C8 310 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 MRPL43Q8N983 215 aaKnown RBP4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 LEMD2Q8NC56 503 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 OR52B6Q8NGF0 335 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 RSPH1Q8WYR4 309 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 COG3Q96JB2 828 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 RPGRIP1Q96KN7 1286 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 NSMCE2Q96MF7 247 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 RAB40CQ96S21 281 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 SPAG8Q99932 426 aaPredicted RBP4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 PINK1Q9BXM7 581 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 HSD3B7Q9H2F3 369 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 GDF3Q9NR23 364 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 TEX10Q9NXF1 929 aaPredicted RBP4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 THEGQ9P2T0 379 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 HOOK1Q9UJC3 728 aaKnown RBP4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 NCAPD2Q15021 1401 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 KIF7Q2M1P5 1343 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 USP42Q9H9J4 1324 aaKnown RBP4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 UBR2Q8IWV8 1755 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 AKAP11Q9UKA4 1901 aa4.17□□□□□ -1.74
PRPF38A-203ENST00000487160 INSRP06213 1382 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 FLT4P35916 1363 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 CARMIL3Q8ND23 1372 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 IGHV3-20A0A0C4DH32 117 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 A0A0U1RRA0 63 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 MEX3AA1L020 520 aaKnown RBP4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 CHEK1O14757 476 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 LRP3O75074 770 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 SERPINF2P08697 491 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 KRT5P13647 590 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 CCNA2P20248 432 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 IL10P22301 178 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 RPA1P27694 616 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 NDST2P52849 883 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 LIMK2P53671 638 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 ERVK-16P61578 105 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 GAMTQ14353 236 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 EXOSC7Q15024 291 aaKnown RBP4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 MOGAT2Q3SYC2 334 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 ISLR2Q6UXK2 745 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 BNIPLQ7Z465 357 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 ITIH5Q86UX2 942 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 KDM8Q8N371 416 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 PARP8Q8N3A8 854 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 AQP11Q8NBQ7 271 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 MRPL24Q96A35 216 aaKnown RBP4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 NSMCE3Q96MG7 304 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 FAM111AQ96PZ2 611 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 COQ7Q99807 217 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 JPH2Q9BR39 696 aaPredicted RBP4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 KRT23Q9C075 422 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 SIRPDQ9H106 197 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 UPF3AQ9H1J1 476 aaKnown RBP4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 NDE1Q9NXR1 346 aa4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 DIMT1Q9UNQ2 313 aaKnown RBP4.16□□□□□ -1.74
PRPF38A-203ENST00000487160 CSDE1O75534 798 aaKnown RBP4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 TGFAP01135 160 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 CXCL10P02778 98 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 AKT2P31751 481 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 ID1P41134 155 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 ALDH3B1P43353 468 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 ACADSBP45954 432 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 CCL11P51671 97 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 TMEM50BP56557 158 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 GSCP56915 257 aaPredicted RBP4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 NLRP11P59045 1033 aaKnown RBP4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 ABCE1P61221 599 aaKnown RBP4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 SSTP61278 116 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 RPL27P61353 136 aaKnown RBP4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 MAP2K1Q02750 393 aaPredicted RBP4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 CALCOCO2Q13137 446 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 RIGQ13278 110 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 KIAA0141Q14154 515 aaPredicted RBP4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 SMC1AQ14683 1233 aaKnown RBP4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 MLF2Q15773 248 aaPredicted RBP4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 DEFB115Q30KQ5 88 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 FASTKD1Q53R41 847 aaKnown RBP4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 DCAF12Q5T6F0 453 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 HIST2H2AA3Q6FI13 130 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 ADGRD2Q7Z7M1 963 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 METTL4Q8N3J2 472 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 RELL2Q8NC24 303 aaPredicted RBP4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 OR6F1Q8NGZ6 308 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 GOLGA5Q8TBA6 731 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 TCP11Q8WWU5 503 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 AGAP4Q96P64 663 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 ALKBH3Q96Q83 286 aaPredicted RBP4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 TAAR6Q96RI8 345 aa4.15□□□□□ -1.75
PRPF38A-203ENST00000487160 FGFBP2Q9BYJ0 223 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms