RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 IL20RAQ9UHF4 553 aa2.85□□□□□ -1.95
SNRNP27-204ENST00000487029 BCAP29Q9UHQ4 241 aa2.85□□□□□ -1.95
SNRNP27-204ENST00000487029 CLCA3PQ9Y6N3 262 aa2.85□□□□□ -1.95
SNRNP27-204ENST00000487029 TEX48A0A1B0GUV7 120 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 CYB561D2O14569 222 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 ADAM12O43184 909 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 B3GALNT1O75752 331 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 GSTA1P08263 222 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 HCKP08631 526 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 FCGR3AP08637 254 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 GHRP10912 638 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 DNAJB1P25685 340 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 CCND2P30279 289 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 CHRNA3P32297 505 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 TRIM23P36406 574 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 CD86P42081 329 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 PRELPP51888 382 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 GSTO1P78417 241 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 ACY1Q03154 408 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 GABPB1Q06547 395 aaPredicted RBP2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 KARSQ15046 597 aaKnown RBP2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 INAQ16352 499 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 CCL14Q16627 93 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 ZSWIM7Q19AV6 140 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 TTC31Q49AM3 519 aaPredicted RBP2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 TCHHL1Q5QJ38 904 aaPredicted RBP2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 C12orf60Q5U649 245 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 IRGCQ6NXR0 463 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 ZCCHC12Q6PEW1 402 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 GPRIN3Q6ZVF9 776 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 MOB2Q70IA6 237 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 TMUB2Q71RG4 321 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 GOLGA7Q7Z5G4 137 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 ADCK1Q86TW2 530 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 LUZP1Q86V48 1076 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 AMZ2Q86W34 360 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 LYG1Q8N1E2 194 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 MINDY2Q8NBR6 621 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 FAM71CQ8NEG0 241 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 ZNF397Q8NF99 534 aaPredicted RBP2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 BEST4Q8NFU0 473 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 ATOH8Q96SQ7 321 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 PSMB7Q99436 277 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 C19orf43Q9BQ61 176 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 RBM24Q9BX46 236 aaKnown RBP2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 RAB11FIP5Q9BXF6 653 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 ELL3Q9HB65 397 aaPredicted RBP2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 NRN1Q9NPD7 142 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 NGBQ9NPG2 151 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 STARD5Q9NSY2 213 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 TAS2R16Q9NYV7 291 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 SEC14L4Q9UDX3 406 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 ZNF346Q9UL40 294 aaKnown RBP2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 EMCNQ9ULC0 261 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 ZNF490Q9ULM2 529 aaPredicted RBP2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 SLC9A8Q9Y2E8 581 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 CPQQ9Y646 472 aa2.84□□□□□ -1.95
SNRNP27-204ENST00000487029 SYNJ2O15056 1496 aa2.84□□□□□ -1.96
SNRNP27-204ENST00000487029 NPIPA5A0A0B4J1W7 369 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 IGHV3-16A0A0C4DH30 117 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 A0A1W2PPR1 153 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 NPIPA5E9PKD4 350 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 STK17BO94768 372 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 TRIM16O95361 564 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 PTBP3O95758 552 aaKnown RBP2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 OAS1P00973 400 aaKnown RBP2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 ZCCHC18P0CG32 403 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 PTPN4P29074 926 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 PPP2R1BP30154 601 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 PRDX2P32119 198 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 GSK3BP49841 420 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 SGSHP51688 502 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 SPP2Q13103 211 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 CEBPEQ15744 281 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 SNAI3Q3KNW1 292 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 ANKRD55Q3KP44 614 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 ACSF3Q4G176 576 aaPredicted RBP2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 C9orf66Q5T8R8 295 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 REP15Q6BDI9 236 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 EMBQ6PCB8 327 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 ISLR2Q6UXK2 745 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 ZNF841Q6ZN19 808 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 SYVN1Q86TM6 617 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 GTSCR1Q86UQ5 136 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 GPBP1Q86WP2 473 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 C17orf47Q8NEP4 570 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 FCGR1BQ92637 280 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 NCLNQ969V3 563 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 CCDC51Q96ER9 411 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 WRAP53Q9BUR4 548 aaKnown RBP2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 ST6GALNAC5Q9BVH7 336 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 GPR174Q9BXC1 333 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 ROPN1Q9HAT0 212 aaPredicted RBP2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 IL1RL2Q9HB29 575 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 HPF1Q9NWY4 346 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 KLK13Q9UKR3 277 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 IKZF3Q9UKT9 509 aa2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 MRPL11Q9Y3B7 192 aaKnown RBP2.83□□□□□ -1.96
SNRNP27-204ENST00000487029 A0A1B0GTH9 108 aa2.82□□□□□ -1.96
SNRNP27-204ENST00000487029 RPL37AP8A6NKH3 93 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms