RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 H6PDO95479 791 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 SNAP29O95721 258 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 NELFEP18615 380 aaKnown RBP10.9□□□□□ -0.66
PRKCB-207ENST00000486868 MAP3K8P41279 467 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 LIMS1P48059 325 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 CASP9P55211 416 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 OR1D5P58170 312 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 RPS26P62854 115 aaKnown RBP10.9□□□□□ -0.66
PRKCB-207ENST00000486868 TUBA4AP68366 448 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 SHC2P98077 582 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 MYBPC1Q00872 1141 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 MGAT2Q10469 447 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 SERTAD2Q14140 314 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 SYPL1Q16563 259 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 DUSP7Q16829 419 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 PRICKLE4Q2TBC4 344 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 TMEM71Q6P5X7 295 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 DHRS4L2Q6PKH6 230 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 PRSS41Q7RTY9 318 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 DGLUCYQ7Z3D6 616 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 TMEM179BQ7Z7N9 219 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 GALNT10Q86SR1 603 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 CYP4Z1Q86W10 505 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 CDRT4Q8N9R6 151 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 DTWD2Q8NBA8 298 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 PIK3C3Q8NEB9 887 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 ZNF555Q8NEP9 628 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 OR9A4Q8NGU2 314 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 RAB8BQ92930 207 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 OR1F2PQ96R84 312 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 MRPS26Q9BYN8 205 aaKnown RBP10.9□□□□□ -0.66
PRKCB-207ENST00000486868 ZNF768Q9H5H4 540 aaKnown RBP10.9□□□□□ -0.66
PRKCB-207ENST00000486868 CAPN10Q9HC96 672 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 FAM118AQ9NWS6 357 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 VNN3Q9NY84 501 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 NDUFA13Q9P0J0 144 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 SEC14L3Q9UDX4 400 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 ENOPH1Q9UHY7 261 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 TMEFF2Q9UIK5 374 aaPredicted RBP10.9□□□□□ -0.66
PRKCB-207ENST00000486868 ACAD8Q9UKU7 415 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 CLCA2Q9UQC9 943 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 SLC9A8Q9Y2E8 581 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 MYRFQ9Y2G1 1151 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 IFT52Q9Y366 437 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 MMACHCQ9Y4U1 282 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 LYVE1Q9Y5Y7 322 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 AK5Q9Y6K8 562 aa10.9□□□□□ -0.66
PRKCB-207ENST00000486868 SNRNP200O75643 2136 aaKnown RBP10.9□□□□□ -0.67
PRKCB-207ENST00000486868 SPAG17Q6Q759 2223 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 EME2A4GXA9 379 aaPredicted RBP10.89□□□□□ -0.67
PRKCB-207ENST00000486868 PRAMEF25A6NGN4 478 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 ZNF860A6NHJ4 632 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 TRIM64CA6NLI5 447 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 H3BNH8 94 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 TNFRSF11BO00300 401 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 PCDHGA12O60330 932 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 SMNDC1O75940 238 aaKnown RBP eCLIP10.89□□□□□ -0.67
PRKCB-207ENST00000486868 OXSR1O95747 527 aaPredicted RBP10.89□□□□□ -0.67
PRKCB-207ENST00000486868 CER1O95813 267 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 LGI1O95970 557 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 RECKO95980 971 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 OPN1SWP03999 348 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 CHRM4P08173 479 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 PRKAR1BP31321 381 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 RRM2P31350 389 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 RYKP34925 604 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 SOX18P35713 384 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 ARL4DP49703 201 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 IST1P53990 364 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 PRKAG1P54619 331 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 OLR1P78380 273 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 CFHR1Q03591 330 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 FUT5Q11128 374 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 KEAP1Q14145 624 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 PUM1Q14671 1186 aaKnown RBP eCLIP10.89□□□□□ -0.67
PRKCB-207ENST00000486868 DEFB110Q30KQ9 67 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 HLA-BQ31612 363 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 ARHGAP11BQ3KRB8 267 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 CEP68Q76N32 757 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 BMP8AQ7Z5Y6 402 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 LINC00471Q8N535 108 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 TMEM52Q8NDY8 209 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 GPR32P1Q8NGA4 272 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 OR5T3Q8NGG3 340 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 OR10Q1Q8NGQ4 319 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 GIPC3Q8TF64 312 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 CYGBQ8WWM9 190 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 OIT3Q8WWZ8 545 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 KAT2AQ92830 837 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 SLC35A4Q96G79 324 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 COL21A1Q96P44 957 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 AMBRA1Q9C0C7 1298 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 FAM192AQ9GZU8 254 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 SAP130Q9H0E3 1048 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 SLC38A1Q9H2H9 487 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 TOR3AQ9H497 397 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 MTHFD2LQ9H903 347 aaPredicted RBP10.89□□□□□ -0.67
PRKCB-207ENST00000486868 SMURF2Q9HAU4 748 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 MAT2BQ9NZL9 334 aa10.89□□□□□ -0.67
PRKCB-207ENST00000486868 SLC6A14Q9UN76 642 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms