RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 NXF5Q9H1B4 397 aaKnown RBP12.96□□□□□ -0.33
SDCCAG3-211ENST00000486441 OR10A5Q9H207 317 aa12.96□□□□□ -0.33
SDCCAG3-211ENST00000486441 ALG9Q9H6U8 611 aa12.96□□□□□ -0.33
SDCCAG3-211ENST00000486441 C6orf203Q9P0P8 240 aaPredicted RBP12.96□□□□□ -0.33
SDCCAG3-211ENST00000486441 HEATR5AQ86XA9 2040 aa12.96□□□□□ -0.34
SDCCAG3-211ENST00000486441 GOLGA6L10A0A0M3HER8 536 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 LRRC14BA6NHZ5 514 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 FAM171A2A8MVW0 826 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 CAPN14A8MX76 684 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 INAFM1C9JVW0 142 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 UBXN8O00124 270 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 ARHGEF9O43307 516 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 CTIFO43310 598 aaKnown RBP12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 ICOSLGO75144 302 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 TGM6O95932 706 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 GBAP04062 536 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 SSTR1P30872 391 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 TLX1P31314 330 aaPredicted RBP12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 STARP49675 285 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 CAPN12Q6ZSI9 719 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 CXXC5Q7LFL8 322 aaKnown RBP12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 TRIM42Q8IWZ5 723 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 GCNT2Q8N0V5 402 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 SPATA3Q8NHX4 192 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 WDR20Q8TBZ3 569 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 EXT2Q93063 718 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 RBBP8Q99708 897 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 OR2B2Q9GZK3 357 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 GALNT9Q9HCQ5 603 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 NSMCE4AQ9NXX6 385 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 PSD3Q9NYI0 1048 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 ADGRE2Q9UHX3 823 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 CES1P1Q9UKY3 287 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 RNF112Q9ULX5 631 aa12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 RAI1Q7Z5J4 1906 aaPredicted RBP12.95□□□□□ -0.34
SDCCAG3-211ENST00000486441 H0YIV9 168 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 SNPHO15079 494 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 ERN1O75460 977 aaKnown RBP12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 PPM1BO75688 479 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 NR2F6P10588 404 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 CYP4B1P13584 511 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 STMN1P16949 149 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 NAGAP17050 411 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 PTX3P26022 381 aaPredicted RBP12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 BUD31P41223 144 aaPredicted RBP12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 MASP1P48740 699 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 PCYT1AP49585 367 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 LHX2P50458 406 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 NEK2P51955 445 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 SLC12A2P55011 1212 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 CLDN18P56856 261 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 RAB10P61026 200 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 KRTAP1-1Q07627 177 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 CUL3Q13618 768 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 CAPRIN1Q14444 709 aaKnown RBP12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 ZNF474Q6S9Z5 364 aaPredicted RBP12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 FAM111BQ6SJ93 734 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 ANGPTL8Q6UXH0 198 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 CYS1Q717R9 158 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 TEX9Q8N6V9 391 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 OR1J4Q8NGS1 313 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 STAG3L4Q8TBR4 150 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 STARD4Q96DR4 205 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 TSPAN17Q96FV3 270 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 ZFP3Q96NJ6 502 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 HS3ST6Q96QI5 342 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 PIGQQ9BRB3 760 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 SERHLQ9NQF3 203 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 LYARQ9NX58 379 aaKnown RBP12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 NUDT4Q9NZJ9 180 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 OPTCQ9UBM4 332 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 ZNF639Q9UID6 485 aa12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 EXO1Q9UQ84 846 aaKnown RBP12.94□□□□□ -0.34
SDCCAG3-211ENST00000486441 A0A1W2PNV4 684 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 FAM159BA6NKW6 160 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 GOLGA6L6A8MZA4 724 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 SMAD7O15105 426 aaKnown RBP12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 HCRTR2O43614 444 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 SMPD2O60906 423 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 KERAO60938 352 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 UGT2B11O75310 529 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 CCKARP32238 428 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 MC3RP41968 323 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 XKP51811 444 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 RAP1GDS1P52306 607 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 CLDN15P56746 228 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 GPX6P59796 221 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 SRYQ05066 204 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 DUSP2Q05923 314 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 RCAN2Q14206 197 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 SETDB1Q15047 1291 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 TOMM20Q15388 145 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 ACKR1Q16570 336 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 LIPJQ5W064 366 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 NUP54Q7Z3B4 507 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 YTHDF3Q7Z739 585 aaKnown RBP12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 CMC1Q7Z7K0 106 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 CREG2Q8IUH2 290 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 P3H2Q8IVL5 708 aa12.93□□□□□ -0.34
SDCCAG3-211ENST00000486441 GALNT12Q8IXK2 581 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms