RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 DET1Q7L5Y6 550 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 CHMP1BQ7LBR1 199 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 NIPA1Q7RTP0 329 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 CENPVQ7Z7K6 275 aaPredicted RBP3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 ZER1Q7Z7L7 766 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 GLRX5Q86SX6 157 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 TMEM150AQ86TG1 271 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 ERICH1Q86X53 443 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 RYBPQ8N488 228 aaPredicted RBP3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 FAM89BQ8N5H3 189 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 ALLCQ8N6M5 410 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 POM121L12Q8N7R1 296 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 RASGEF1AQ8N9B8 481 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 RNF149Q8NC42 400 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 ZNF461Q8TAF7 563 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 ATXN7L3BQ96GX2 97 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 C2orf48Q96LS8 159 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 FAM218AQ96MZ4 157 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 MUS81Q96NY9 551 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 FEVQ99581 238 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 KRT23Q9C075 422 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 MTHFD2LQ9H903 347 aaPredicted RBP3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 PRR34Q9NV39 138 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 FAM120CQ9NX05 1096 aaKnown RBP3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 FBXL5Q9UKA1 691 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 DDX19BQ9UMR2 479 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 SELENOKQ9Y6D0 94 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 DNHD1Q96M86 4753 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 SPG11Q96JI7 2443 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 A0A087WWV3 80 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 SERINC4A6NH21 518 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 B3GAT3O94766 335 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 ERLIN2O94905 339 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 KLF8O95600 359 aaPredicted RBP3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 CYP11B2P19099 503 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 ELAVL4P26378 380 aaKnown RBP3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 GABRR2P28476 465 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 PDHA2P29803 388 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 ADSSP30520 456 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 RDXP35241 583 aaKnown RBP3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 OPRD1P41143 372 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 CASP2P42575 452 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 CLDN15P56746 228 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 PTENP60484 403 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 POLR2LP62875 67 aaKnown RBP3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 ZNF33AQ06730 810 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 ALCAMQ13740 583 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 UPP1Q16831 310 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 ZBTB49Q6ZSB9 765 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 SLC47A2Q86VL8 602 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 ZFAND4Q86XD8 727 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 LINC00612Q8N6U2 182 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 C9orf43Q8TAL5 461 aaPredicted RBP3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 SETD7Q8WTS6 366 aaKnown RBP3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 PIK3R3Q92569 461 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 CNRIP1Q96F85 164 aaPredicted RBP3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 P2RY13Q9BPV8 354 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 LRRC2Q9BYS8 371 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 SLC2A11Q9BYW1 496 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 DHX33Q9H6R0 707 aaKnown RBP3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 NRBP2Q9NSY0 501 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 COL27A1Q8IZC6 1860 aaPredicted RBP3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 CSMD2Q7Z408 3487 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 PCNX1Q96RV3 2341 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 CITO14578 2027 aa3.7□□□□□ -1.82
SMARCC1-207ENST00000485833 ZFC3H1O60293 1989 aaKnown RBP3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 IGHV1OR15-9A0A0B4J2B8 117 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 SMCO2A6NFE2 343 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 CLDN4O14493 209 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 SNX3O60493 162 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 PSMD10O75832 226 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 TDP2O95551 362 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 HLA-EP13747 358 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 GABRG2P18507 467 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 ATF6P18850 670 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 GLRA2P23416 452 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 NAPAP54920 295 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 CSE1LP55060 971 aaKnown RBP3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 IL9RQ01113 521 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 DNAJC3Q13217 504 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 SRSF9Q13242 221 aaKnown RBP eCLIP3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 SRSF6Q13247 344 aaKnown RBP3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 PLD1Q13393 1074 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 EMC2Q15006 297 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 IMMTQ16891 758 aaKnown RBP3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 LCLAT1Q6UWP7 414 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 CLEC18BQ6UXF7 455 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 POMGNT2Q8NAT1 580 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 POGLUT1Q8NBL1 392 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 ATAD1Q8NBU5 361 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 CHPT1Q8WUD6 406 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 C18orf25Q96B23 403 aaPredicted RBP3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 ZMAT2Q96NC0 199 aaKnown RBP3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 LINC00597Q9H2U6 94 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 GSN-AS1Q9NRJ2 163 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 LNPEPQ9UIQ6 1025 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 PRDM4Q9UKN5 801 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 ELF5Q9UKW6 265 aaPredicted RBP3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 RARRES3Q9UL19 164 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 MMP17Q9ULZ9 603 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms