RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 HPS4Q9NQG7 708 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 CNOT2Q9NZN8 540 aaKnown RBP3.14□□□□□ -1.91
SMC4-215ENST00000484799 ERVK-18Q9QC07 812 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 MRTO4Q9UKD2 239 aaKnown RBP3.14□□□□□ -1.91
SMC4-215ENST00000484799 MGAT4AQ9UM21 535 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 MRPS18CQ9Y3D5 142 aaKnown RBP3.14□□□□□ -1.91
SMC4-215ENST00000484799 PRRC2AP48634 2157 aaKnown RBP3.14□□□□□ -1.91
SMC4-215ENST00000484799 YJEFN3A6XGL0 299 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 P2RX6O15547 441 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 MLNRO43193 412 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 ZNF749O43361 778 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 TNFSF12O43508 249 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 IDH1O75874 414 aaKnown RBP3.13□□□□□ -1.91
SMC4-215ENST00000484799 AKR7A3O95154 331 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 SYNGR4O95473 234 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 IFNB1P01574 187 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 KRT6BP04259 564 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 FAM200BP0CF97 657 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 TPBGLP0DKB5 382 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 B4GALT1P15291 398 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 FEN1P39748 380 aaKnown RBP3.13□□□□□ -1.91
SMC4-215ENST00000484799 MATKP42679 507 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 SLC6A8P48029 635 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 KRT6CP48668 564 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 HSD17B7P56937 341 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 BTG1P62324 171 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 MYBPC1Q00872 1141 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 GABPB1Q06547 395 aaPredicted RBP3.13□□□□□ -1.91
SMC4-215ENST00000484799 MLF2Q15773 248 aaPredicted RBP3.13□□□□□ -1.91
SMC4-215ENST00000484799 GPAT3Q53EU6 434 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 RIPPLY2Q5TAB7 128 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 DDI2Q5TDH0 399 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 LEMD1Q68G75 181 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 Q71RC1 249 aaPredicted RBP3.13□□□□□ -1.91
SMC4-215ENST00000484799 CNPY4Q8N129 248 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 LRRC17Q8N6Y2 441 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 CCDC197Q8NCU1 140 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 DENND6BQ8NEG7 585 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 OR4L1Q8NH43 312 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 CD99L2Q8TCZ2 262 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 VPS39Q96JC1 886 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 AGPAT1Q99943 283 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 FUNDC2Q9BWH2 189 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 PAPOLGQ9BWT3 736 aaKnown RBP3.13□□□□□ -1.91
SMC4-215ENST00000484799 SIRPDQ9H106 197 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 SLITRK2Q9H156 845 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 SLC26A1Q9H2B4 701 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 NDUFA13Q9P0J0 144 aa3.13□□□□□ -1.91
SMC4-215ENST00000484799 RAD54L2Q9Y4B4 1467 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 A0A087WZY1 265 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 IGHV3-20A0A0C4DH32 117 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 A0A0U1RRA0 63 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 A0A1B0GWJ7 208 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 GLTPD2A6NH11 291 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 RPL37AP8A6NKH3 93 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 LRP3O75074 770 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 SCGB2A1O75556 95 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 PTBP3O95758 552 aaKnown RBP3.12□□□□□ -1.91
SMC4-215ENST00000484799 KRT8P05787 483 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 GNSP15586 552 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 GJB2P29033 226 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 AKT2P31751 481 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 PRPHP41219 470 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 MAGEA4P43358 317 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 CCL11P51671 97 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 MTTPP55157 894 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 TRA2BP62995 288 aaKnown RBP3.12□□□□□ -1.91
SMC4-215ENST00000484799 SIX1Q15475 284 aaPredicted RBP3.12□□□□□ -1.91
SMC4-215ENST00000484799 CEBPEQ15744 281 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 Q1RN00 199 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 RFTN2Q52LD8 501 aaPredicted RBP3.12□□□□□ -1.91
SMC4-215ENST00000484799 PRR30Q53SZ7 412 aaPredicted RBP3.12□□□□□ -1.91
SMC4-215ENST00000484799 SPANXN4Q5MJ08 99 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 RTL6Q6ICC9 239 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 GALNT17Q6IS24 598 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 CAPN13Q6MZZ7 669 aaPredicted RBP3.12□□□□□ -1.91
SMC4-215ENST00000484799 CWC27Q6UX04 472 aaKnown RBP3.12□□□□□ -1.91
SMC4-215ENST00000484799 ISLR2Q6UXK2 745 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 Q6ZVQ6 151 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 YRDCQ86U90 279 aaKnown RBP3.12□□□□□ -1.91
SMC4-215ENST00000484799 SERINC5Q86VE9 423 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 KRTAP11-1Q8IUC1 163 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 LRRC49Q8IUZ0 686 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 GMCL1P1Q8NEA9 526 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 TCP11Q8WWU5 503 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 FCGR1BQ92637 280 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 NCLNQ969V3 563 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 PINX1Q96BK5 328 aaKnown RBP3.12□□□□□ -1.91
SMC4-215ENST00000484799 TRIM44Q96DX7 344 aaPredicted RBP3.12□□□□□ -1.91
SMC4-215ENST00000484799 THUMPD2Q9BTF0 503 aaKnown RBP3.12□□□□□ -1.91
SMC4-215ENST00000484799 COG4Q9H9E3 785 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 WDR41Q9HAD4 459 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 VAT1LQ9HCJ6 419 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 UBE2TQ9NPD8 197 aaPredicted RBP3.12□□□□□ -1.91
SMC4-215ENST00000484799 FAM212BQ9NTI7 297 aaPredicted RBP3.12□□□□□ -1.91
SMC4-215ENST00000484799 BCAP29Q9UHQ4 241 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 ZNF490Q9ULM2 529 aaPredicted RBP3.12□□□□□ -1.91
SMC4-215ENST00000484799 MGAT4BQ9UQ53 548 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 ENTPD4Q9Y227 616 aa3.12□□□□□ -1.91
SMC4-215ENST00000484799 OR1A2Q9Y585 309 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms