RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 FAM227AF5H4B4 570 aa17.08■□□□□ 0.33
SSR4-209ENST00000482902 TSC22D2O75157 780 aa17.08■□□□□ 0.33
SSR4-209ENST00000482902 SLC2A2P11168 524 aaPredicted RBP17.08■□□□□ 0.33
SSR4-209ENST00000482902 RPS26P62854 115 aaKnown RBP17.08■□□□□ 0.33
SSR4-209ENST00000482902 RPS26P11Q5JNZ5 115 aaPredicted RBP17.08■□□□□ 0.33
SSR4-209ENST00000482902 TRIQKQ629K1 86 aa17.08■□□□□ 0.33
SSR4-209ENST00000482902 MZT2BQ6NZ67 158 aa17.08■□□□□ 0.33
SSR4-209ENST00000482902 ZNF296Q8WUU4 475 aaPredicted RBP17.08■□□□□ 0.33
SSR4-209ENST00000482902 GPR137Q96N19 417 aa17.08■□□□□ 0.33
SSR4-209ENST00000482902 TOX2Q96NM4 488 aa17.08■□□□□ 0.33
SSR4-209ENST00000482902 ACAT2Q9BWD1 397 aa17.08■□□□□ 0.33
SSR4-209ENST00000482902 PPP1R3EQ9H7J1 279 aa17.08■□□□□ 0.33
SSR4-209ENST00000482902 ANKRA2Q9H9E1 313 aa17.08■□□□□ 0.33
SSR4-209ENST00000482902 C11orf16Q9NQ32 467 aa17.08■□□□□ 0.33
SSR4-209ENST00000482902 HCFC2Q9Y5Z7 792 aa17.08■□□□□ 0.33
SSR4-209ENST00000482902 DNMT3AQ9Y6K1 912 aaPredicted RBP17.08■□□□□ 0.33
SSR4-209ENST00000482902 FAM240BA0A1B0GVZ2 78 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 SNTNA6NMZ2 147 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 SLC43A1O75387 559 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 DDX5P17844 614 aaKnown RBP17.08■□□□□ 0.32
SSR4-209ENST00000482902 DDX6P26196 483 aaKnown RBP eCLIP17.08■□□□□ 0.32
SSR4-209ENST00000482902 SDC2P34741 201 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 SLC9A3P48764 834 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 PER3P56645 1201 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 ABATP80404 500 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 PUM1Q14671 1186 aaKnown RBP eCLIP17.08■□□□□ 0.32
SSR4-209ENST00000482902 RAET1GQ6H3X3 334 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 REEP3Q6NUK4 255 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 TMIGD1Q6UXZ0 262 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 CEACAM20Q6UY09 585 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 IKBIPQ70UQ0 350 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 SLC30A8Q8IWU4 369 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 Q8N402 240 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 C19orf18Q8NEA5 215 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 UBE2E3Q969T4 207 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 GFM1Q96RP9 751 aaKnown RBP17.08■□□□□ 0.32
SSR4-209ENST00000482902 SOSTQ9BQB4 213 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 C12orf4Q9NQ89 552 aa17.08■□□□□ 0.32
SSR4-209ENST00000482902 FFAR1O14842 300 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 SPINT1O43278 529 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 LYRM1O43325 122 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 PLOD3O60568 738 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 GPR1P46091 355 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 SNRPGP62308 76 aaKnown RBP17.07■□□□□ 0.32
SSR4-209ENST00000482902 NFE2L1Q14494 772 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 NCF4Q15080 339 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 TMEM201Q5SNT2 666 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 ZNF770Q6IQ21 691 aaPredicted RBP17.07■□□□□ 0.32
SSR4-209ENST00000482902 TNFAIP8L2Q6P589 184 aaPredicted RBP17.07■□□□□ 0.32
SSR4-209ENST00000482902 WDR53Q7Z5U6 358 aaPredicted RBP17.07■□□□□ 0.32
SSR4-209ENST00000482902 TMEM145Q8NBT3 493 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 PROKR2Q8NFJ6 384 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 COQ3Q9NZJ6 369 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 PLAGL1Q9UM63 463 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 HELZP42694 1942 aaKnown RBP17.07■□□□□ 0.32
SSR4-209ENST00000482902 DSPPQ9NZW4 1301 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 TRBV4-1A0A0J9YWV2 114 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 ARRDC5A6NEK1 342 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 C5orf58C9J3I9 102 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 TLR4O00206 839 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 POP7O75817 140 aaKnown RBP17.07■□□□□ 0.32
SSR4-209ENST00000482902 PRKAR1AP10644 381 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 ENPP1P22413 925 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 LIM2P55344 173 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 ZNF91Q05481 1191 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 LEXMQ3ZCV2 418 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 PRAMEF14Q5SWL7 426 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 PRAMEF13Q5VWM6 474 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 SLC9B2Q86UD5 537 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 ZNF547Q8IVP9 402 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 PDXPQ96GD0 296 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 NELL2Q99435 816 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 KATNB1Q9BVA0 655 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 KCND3Q9UK17 655 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 ICKQ9UPZ9 632 aa17.07■□□□□ 0.32
SSR4-209ENST00000482902 PI15O43692 258 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 ORC5O43913 435 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 FKTNO75072 461 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 BCHEP06276 602 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 RHOP08100 348 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 ZNF250P15622 560 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 TNNI3P19429 210 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 MRPL28Q13084 256 aaKnown RBP17.06■□□□□ 0.32
SSR4-209ENST00000482902 IKZF1Q13422 519 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 MFSD13AQ14CX5 517 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 P2RY14Q15391 338 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 FLYWCH1Q4VC44 716 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 PDZD3Q86UT5 571 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 HORMAD2Q8N7B1 307 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 TMEM203Q969S6 136 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 NUS1Q96E22 293 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 ZDHHC5Q9C0B5 715 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 RNF208Q9H0X6 261 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 MARK1Q9P0L2 795 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 RFPL3O75679 317 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 FEN1P39748 380 aaKnown RBP17.06■□□□□ 0.32
SSR4-209ENST00000482902 EPHA5P54756 1037 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 RGS1Q08116 209 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 RNLSQ5VYX0 342 aa17.06■□□□□ 0.32
SSR4-209ENST00000482902 ANKRD54Q6NXT1 300 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms