RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 PGAP3Q96FM1 320 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 WDR92Q96MX6 357 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ZNF649Q9BS31 505 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 RLIMQ9NVW2 624 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ASB4Q9Y574 426 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 AP1M2Q9Y6Q5 423 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 OR2B3O76000 313 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 TBX18O95935 607 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 CTHP32929 405 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 MAP2K3P46734 347 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 OR6N2Q8NGY6 317 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 DOCK6Q96HP0 2047 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 MPPED1O15442 326 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 SSX5O60225 188 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 SOD2P04179 222 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 DNASE1P24855 282 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 AKR1C2P52895 323 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 TBRG1Q3YBR2 411 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 PTCHD1Q96NR3 888 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 RANBP9Q96S59 729 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 PPP1R14DQ9NXH3 145 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ANKRD33BA6NCL7 494 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 SOWAHBA6NEL2 793 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ZNF705EA8MWA4 302 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 TEAD2Q15562 447 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 MPP7Q5T2T1 576 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 HMBOX1Q6NT76 420 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 POGLUT1Q8NBL1 392 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 FOXJ1Q92949 421 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 RAB39BQ96DA2 213 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ZNF43P17038 809 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 TYRP1P17643 537 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ACRV1P26436 265 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 UBE2NP61088 152 aaKnown RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 RING1Q06587 406 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 OR56B2PQ8NGI1 322 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 CASD1Q96PB1 797 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 SIX2Q9NPC8 291 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 GPR160Q9UJ42 338 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 A8MXE2 369 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 RTCAO00442 366 aaKnown RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 VNN1O95497 513 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ALDOAP04075 364 aaKnown RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 LEPRP48357 1165 aaKnown RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 OR4D2P58180 307 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 SLC25A11Q02978 314 aaKnown RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 SERTAD2Q14140 314 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 TMPRSS12Q86WS5 348 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 MINDY3Q9H8M7 445 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 PCDHGA6Q9Y5G7 932 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 NDUFV2P19404 249 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 RELL1Q8IUW5 271 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 ISOC1Q96CN7 298 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 CERS4Q9HA82 394 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 BLACEA4D250 179 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 NRP1O14786 923 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 DRD2P14416 443 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 RPS2P15880 293 aaKnown RBP9.12□□□□□ -0.95
VEGFA-212ENST00000480614 FASLGP48023 281 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 PPP5CP53041 499 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 NKX3-2P78367 333 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 TRIM46Q7Z4K8 759 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 DNAJC22Q8N4W6 341 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 ACBD7Q8N6N7 88 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 PAK4O96013 591 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-212ENST00000480614 CDK3Q00526 305 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 TMEM115Q12893 351 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-212ENST00000480614 UGT3A2Q3SY77 523 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 MTFR2Q6P444 385 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 ZDHHC24Q6UX98 284 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 TBC1D20Q96BZ9 403 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 EIF5A2Q9GZV4 153 aaKnown RBP9.12□□□□□ -0.95
VEGFA-212ENST00000480614 RARRES3Q9UL19 164 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 LAMB1P07942 1786 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 FANCMQ8IYD8 2048 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 C2orf72A6NCS6 295 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 PYCR1P32322 319 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 ARL11Q969Q4 196 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 SLC25A44Q96H78 314 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-212ENST00000480614 A6NCN8 305 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 GGT3PA6NGU5 568 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 INPPL1O15357 1258 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 HTR3AP46098 478 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 GJA9P57773 515 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 SCGB2A2Q13296 93 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 EIF4HQ15056 248 aaKnown RBP9.12□□□□□ -0.95
VEGFA-212ENST00000480614 SERINC5Q86VE9 423 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 PLXDC1Q8IUK5 500 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 UEVLDQ8IX04 471 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 CDC6Q99741 560 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 CDH20Q9HBT6 801 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 JRKO75564 520 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 H2AFB2P0C5Z0 115 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 FECHP22830 423 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 GCGRP47871 477 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 FNTBP49356 437 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 RAET1LQ5VY80 246 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 ZNF366Q8N895 744 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 NUP43Q8NFH3 380 aa9.12□□□□□ -0.95
VEGFA-212ENST00000480614 KCNK6Q9Y257 313 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms