RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 RIPK3Q9Y572 518 aa3.82□□□□□ -1.8
CMSS1-204ENST00000479555 PCDHAC2Q9Y5I4 1007 aa3.82□□□□□ -1.8
CMSS1-204ENST00000479555 PTGDR2Q9Y5Y4 395 aa3.82□□□□□ -1.8
CMSS1-204ENST00000479555 RNF215Q9Y6U7 377 aa3.82□□□□□ -1.8
CMSS1-204ENST00000479555 LAMB4A4D0S4 1761 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ANKRD36CQ5JPF3 1778 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 USP54Q70EL1 1684 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 A0A0G2JPF8 293 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 LOC100653049A0A140TA62 436 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 A0A1B0GVI7 797 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ATP6AP2A0A1C7CYW4 349 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 LOC390937A0A1W2PQ73 354 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 MEIOCA2RUB1 952 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 HNRNPCL3B7ZW38 293 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 TRIM49D1C9J1S8 452 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 INAFM1C9JVW0 142 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 UBXN8O00124 270 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 CTDSP2O14595 271 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 FPGTO14772 594 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ORC5O43913 435 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 HS6ST1O60243 411 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 PRPSAP2O60256 369 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 PIAS1O75925 651 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 KRT34O76011 436 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 PROSCO94903 275 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 SLITRK3O94933 977 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 CCNB2O95067 398 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 TDP2O95551 362 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ANGPTL1O95841 491 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 LALBAP00709 142 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 F9P00740 461 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 IL1AP01583 271 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 TNNC2P02585 160 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 RPLP0P05388 317 aaKnown RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 IGKV5-2P06315 115 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 HOXD4P09016 255 aaPredicted RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 HNRNPCL4P0DMR1 293 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 RRASP10301 218 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 HSD17B1P14061 328 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ALOX12P18054 663 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 CRHBPP24387 322 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 HOXC8P31273 242 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 NUP62P37198 522 aaPredicted RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 CD79BP40259 229 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 MTNR1AP48039 350 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 MEOX2P50222 304 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 RPL14P50914 215 aaKnown RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 CLCN5P51795 746 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ATXN3P54252 364 aaPredicted RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 CDH13P55290 713 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 PRMT2P55345 433 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 HILS1P60008 231 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 EEF1A1P68104 462 aaKnown RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 CNTN2Q02246 1040 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 EEF1A2Q05639 463 aaKnown RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 PMPCAQ10713 525 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 SNTA1Q13424 505 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ASAH1Q13510 395 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 FRG1Q14331 258 aaKnown RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 PIGHQ14442 188 aaPredicted RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 DMC1Q14565 340 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 KCNJ11Q14654 390 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 EMC2Q15006 297 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 NCF4Q15080 339 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 MAPK11Q15759 364 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 CTF1Q16619 201 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 DUSP6Q16828 381 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 KIF19Q2TAC6 998 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 PARP15Q460N3 678 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 RNF212Q495C1 297 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 CDNFQ49AH0 187 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ATP13A5Q4VNC0 1218 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 SYT6Q5T7P8 510 aaPredicted RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 EEF1A1P5Q5VTE0 462 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 HACD4Q5VWC8 232 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 LCN8Q6JVE9 175 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 LRRC8EQ6NSJ5 796 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 FBXL22Q6P050 247 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 SLC22A25Q6T423 547 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 PLET1Q6UQ28 207 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 MOXD1Q6UVY6 613 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.81□□□□□ -1.88e-8■■■■■ 44.2
CMSS1-204ENST00000479555 GDPGP1Q6ZNW5 385 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 Q6ZTK2 550 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 SH2D5Q6ZV89 423 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 UTS2BQ765I0 119 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 SYVN1Q86TM6 617 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 PHC2Q8IXK0 858 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 METTL4Q8N3J2 472 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 CBR4Q8N4T8 237 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 C1orf52Q8N6N3 182 aaKnown RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 LRRC17Q8N6Y2 441 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 NAT8LQ8N9F0 302 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 KCNH5Q8NCM2 988 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 PAPD5Q8NDF8 572 aaKnown RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 DNAAF1Q8NEP3 725 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 TRPV3Q8NET8 790 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 PPHLN1Q8NEY8 458 aaKnown RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 OR8H1Q8NGG4 311 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 OR52N1Q8NH53 320 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms