RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 DENND6BQ8NEG7 585 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 OR52P1PQ8NH57 321 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 RNF31Q96EP0 1072 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 CDADC1Q9BWV3 514 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 TBL1XR1Q9BZK7 514 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 ACTL8Q9H568 366 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 ERVK13-1Q9NX77 482 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 PCDHGA4Q9Y5G9 962 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 NUMBLQ9Y6R0 609 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 PAPPA2Q9BXP8 1791 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 TCRBV21S2A2A0A5A6 115 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 GBX2P52951 348 aaPredicted RBP13.62□□□□□ -0.23
COL20A1-206ENST00000479501 SCRN3Q0VDG4 424 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 DSG2Q14126 1118 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 UGT3A2Q3SY77 523 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 TCEAL5Q5H9L2 206 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 CBLL1Q75N03 491 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 IGFN1Q86VF2 1251 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 OR4N5Q8IXE1 308 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 SLC7A5P1Q8MH63 180 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 OR4K5Q8NGD3 323 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 LMX1AQ8TE12 382 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 ENAMQ9NRM1 1142 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 TMEM5Q9Y2B1 443 aa13.62□□□□□ -0.23
COL20A1-206ENST00000479501 DNMT3AQ9Y6K1 912 aaPredicted RBP13.62□□□□□ -0.23
COL20A1-206ENST00000479501 TTC3P53804 2025 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 TRAV6A0A075B6T7 132 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 M0R233 179 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 APOL3O95236 402 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 RAB36O95755 333 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 SERPINA3P01011 423 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 GSTT2P0CG29 244 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 SIM1P81133 766 aaPredicted RBP13.61□□□□□ -0.23
COL20A1-206ENST00000479501 LRRC26Q2I0M4 334 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 BTN2A1Q7KYR7 527 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 C7orf57Q8NEG2 295 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 OR9Q2Q8NGE9 314 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 RBCK1Q9BYM8 510 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.61□□□□□ -0.23
COL20A1-206ENST00000479501 SAGE1Q9NXZ1 904 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 GPR83Q9NYM4 423 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 CEPT1Q9Y6K0 416 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 ALPLP05186 524 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 CNR2P34972 360 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 HBA1P69905 142 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 SPHARQ15513 63 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 MICAQ29983 383 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 HSF5Q4G112 596 aaPredicted RBP13.61□□□□□ -0.23
COL20A1-206ENST00000479501 ALG1LQ6GMV1 187 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 PIWIL3Q7Z3Z3 882 aaKnown RBP13.61□□□□□ -0.23
COL20A1-206ENST00000479501 SNX29P2Q8IUI4 249 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 GPN3Q9UHW5 284 aaPredicted RBP13.61□□□□□ -0.23
COL20A1-206ENST00000479501 INTS6Q9UL03 887 aaKnown RBP13.61□□□□□ -0.23
COL20A1-206ENST00000479501 CYP8B1Q9UNU6 501 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 C17orf113A0A1B0GUU1 675 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 OR2AT4A6NND4 320 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 C12orf71A8MTZ7 269 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 CENPBD1B2RD01 187 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 H7C2Y5 167 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 ATP5A1P25705 553 aaKnown RBP13.61□□□□□ -0.23
COL20A1-206ENST00000479501 GABRA3P34903 492 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 MMP12P39900 470 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 MAP2K3P46734 347 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 MLLT10P55197 1068 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF542PQ5EBM4 170 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 SPRED1Q7Z699 444 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 PIAS4Q8N2W9 510 aaPredicted RBP13.61□□□□□ -0.23
COL20A1-206ENST00000479501 ASB12Q8WXK4 309 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 RELTQ969Z4 430 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 EFHD2Q96C19 240 aaPredicted RBP13.61□□□□□ -0.23
COL20A1-206ENST00000479501 TRIM36Q9NQ86 728 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 PIAS3Q9Y6X2 628 aa13.61□□□□□ -0.23
COL20A1-206ENST00000479501 DCKP27707 260 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 KEAP1Q14145 624 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 FLYWCH1Q4VC44 716 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 RPS26P11Q5JNZ5 115 aaPredicted RBP13.6□□□□□ -0.23
COL20A1-206ENST00000479501 CD300LGQ6UXG3 332 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 CEP68Q76N32 757 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 SPARTQ8N0X7 666 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 OR8J2Q8NGG1 315 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 ZSWIM3Q96MP5 696 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 NDC1Q9BTX1 674 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 CLCA1A8K7I4 914 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 PRODHO43272 600 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 KIAA0513O60268 411 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 PTTG1O95997 202 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 PIM1P11309 404 aaPredicted RBP13.6□□□□□ -0.23
COL20A1-206ENST00000479501 CELP19835 753 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 TSPAN5P62079 268 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 TAP2Q03519 686 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 COL9A2Q14055 689 aaPredicted RBP13.6□□□□□ -0.23
COL20A1-206ENST00000479501 PON3Q15166 354 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 DECR1Q16698 335 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 FAM78AQ5JUQ0 283 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF765Q7L2R6 523 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF615Q8N8J6 731 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 SPPL3Q8TCT6 385 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 DOK4Q8TEW6 326 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 LRR1Q96L50 414 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 IL21RQ9HBE5 538 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms