RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 CLEC7AQ9BXN2 247 aa4.28□□□□□ -1.72
RFC4-212ENST00000479307 SLC5A7Q9GZV3 580 aa4.28□□□□□ -1.72
RFC4-212ENST00000479307 ZBP1Q9H171 429 aa4.28□□□□□ -1.72
RFC4-212ENST00000479307 AKIRIN1Q9H9L7 192 aaPredicted RBP4.28□□□□□ -1.72
RFC4-212ENST00000479307 MRPL17Q9NRX2 175 aaKnown RBP4.28□□□□□ -1.72
RFC4-212ENST00000479307 SPG21Q9NZD8 308 aa4.28□□□□□ -1.72
RFC4-212ENST00000479307 MRPS28Q9Y2Q9 187 aaKnown RBP4.28□□□□□ -1.72
RFC4-212ENST00000479307 PCDHGA1Q9Y5H4 931 aa4.28□□□□□ -1.72
RFC4-212ENST00000479307 DOCK5Q9H7D0 1870 aa4.28□□□□□ -1.72
RFC4-212ENST00000479307 MTCL1Q9Y4B5 1905 aaKnown RBP4.27□□□□□ -1.73
RFC4-212ENST00000479307 ANKDD1BA6NHY2 528 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 ZNF195O14628 629 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 GRID2O43424 1007 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 KIF5CO60282 957 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 SAP30O75446 220 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 CLN5O75503 358 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 CEACAM4O75871 244 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 NXPH2O95156 264 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 TRIM16O95361 564 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 LGALS2P05162 132 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 CALML3P27482 149 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 TSFMP43897 325 aaKnown RBP4.27□□□□□ -1.73
RFC4-212ENST00000479307 CRIP2P52943 208 aaPredicted RBP4.27□□□□□ -1.73
RFC4-212ENST00000479307 PMP22Q01453 160 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 SLC34A1Q06495 639 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 GIT2Q14161 759 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 HLA-BQ31612 363 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 ZFP69Q49AA0 526 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 WLSQ5T9L3 541 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 ATP1A1-AS1Q5TC04 95 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 TCEAL6Q6IPX3 200 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 BHLHB9Q6PI77 547 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 RAPH1Q70E73 1250 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 ZNF444Q8N0Y2 327 aaPredicted RBP4.27□□□□□ -1.73
RFC4-212ENST00000479307 SLC39A11Q8N1S5 342 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 LRRC43Q8N309 656 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 CCDC185Q8N715 623 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 TCEANCQ8N8B7 351 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 SPC24Q8NBT2 197 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 ADAD2Q8NCV1 583 aaKnown RBP4.27□□□□□ -1.73
RFC4-212ENST00000479307 TCEAL3Q969E4 200 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 NXPE2Q96DL1 559 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 MRPL9Q9BYD2 267 aaKnown RBP4.27□□□□□ -1.73
RFC4-212ENST00000479307 HOXD1Q9GZZ0 328 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 NAPBQ9H115 298 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 CUEDC2Q9H467 287 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 DPEP2Q9H4A9 486 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 PLCXD1Q9NUJ7 323 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.27□□□□□ -1.73
RFC4-212ENST00000479307 TMEM181Q9P2C4 612 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 CLIP2Q9UDT6 1046 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 STX8Q9UNK0 236 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 SATB2Q9UPW6 733 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 PPP1R3CQ9UQK1 317 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 NUP205Q92621 2012 aa4.27□□□□□ -1.73
RFC4-212ENST00000479307 DOPEY2Q9Y3R5 2298 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 PDCD11Q14690 1871 aaKnown RBP4.26□□□□□ -1.73
RFC4-212ENST00000479307 ASCC3Q8N3C0 2202 aaKnown RBP4.26□□□□□ -1.73
RFC4-212ENST00000479307 CCDC171Q6TFL3 1326 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 IGSF9BQ9UPX0 1349 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 PTPRBP23467 1997 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 A0A087WZ39 114 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 A0A087X002 238 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 A0A087X0K7 114 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 A0A1W2PR80 420 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 A0A1W2PRV1 198 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 ACSL4O60488 711 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 LETM1O95202 739 aaPredicted RBP4.26□□□□□ -1.73
RFC4-212ENST00000479307 MT-ND2P03891 347 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 SOX3P41225 446 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 HNF4AP41235 474 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 SLC1A4P43007 532 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 SSR1P43307 286 aaKnown RBP4.26□□□□□ -1.73
RFC4-212ENST00000479307 CLCN4P51793 760 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 XGP55808 180 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 KIAA1024LP59773 190 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 SNAP25P60880 206 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 CYCSP99999 105 aaKnown RBP4.26□□□□□ -1.73
RFC4-212ENST00000479307 STXBP2Q15833 593 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 DUSP5Q16690 384 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 ADAM5Q6NVV9 412 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 TMEM270Q6UE05 265 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 WDSUB1Q8N9V3 476 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 ZNF248Q8NDW4 579 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 DEFB124Q8NES8 71 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 BCL2L2Q92843 193 aaPredicted RBP4.26□□□□□ -1.73
RFC4-212ENST00000479307 FGF14Q92915 247 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 OMA1Q96E52 524 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 ZNF559Q9BR84 538 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 RPP25Q9BUL9 199 aaKnown RBP4.26□□□□□ -1.73
RFC4-212ENST00000479307 SLC39A8Q9C0K1 460 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 MTHFD2LQ9H903 347 aaPredicted RBP4.26□□□□□ -1.73
RFC4-212ENST00000479307 PNPLA3Q9NST1 481 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 KLHL8Q9P2G9 620 aaPredicted RBP4.26□□□□□ -1.73
RFC4-212ENST00000479307 NCKAP1Q9Y2A7 1128 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 FLNCQ14315 2725 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 CACNA1EQ15878 2313 aa4.26□□□□□ -1.73
RFC4-212ENST00000479307 BOD1L1Q8NFC6 3051 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 PCNX2A6NKB5 2137 aa4.25□□□□□ -1.73
RFC4-212ENST00000479307 WDR19Q8NEZ3 1342 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms