RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 FHP07954 510 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 TCEA1P23193 301 aaKnown RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 FCARP24071 287 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 CERS1P27544 350 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 FLYWCH1Q4VC44 716 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 KIAA1211LQ6NV74 962 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 NRARPQ7Z6K4 114 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 GATAD2AQ86YP4 633 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 CNRIP1Q96F85 164 aaPredicted RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 ZBED6CLQ96FA7 236 aaPredicted RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 SLC35G5Q96KT7 338 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 PHOX2BQ99453 314 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 CDCA4Q9BXL8 241 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 HDAC8Q9BY41 377 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 NXF2Q9GZY0 626 aaKnown RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 EGLN3Q9H6Z9 239 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 WDR26Q9H7D7 661 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 SP140LQ9H930 580 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 TIGARQ9NQ88 270 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 MAN2C1Q9NTJ4 1040 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 CA5BQ9Y2D0 317 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 GPSM3Q9Y4H4 160 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 STON1Q9Y6Q2 735 aa10.2□□□□□ -0.78
VPS52-217ENST00000478934 MDC1Q14676 2089 aaKnown RBP10.2□□□□□ -0.78
VPS52-217ENST00000478934 PLD2O14939 933 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 DNAJB6O75190 326 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 SSTR4P31391 388 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 SOX6P35712 828 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 CASP3P42574 277 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 FRKP42685 505 aaPredicted RBP10.19□□□□□ -0.78
VPS52-217ENST00000478934 PCYT1AP49585 367 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 CAV3P56539 151 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 COPZ1P61923 177 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 ZNF91Q05481 1191 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 PRDX1Q06830 199 aaKnown RBP10.19□□□□□ -0.78
VPS52-217ENST00000478934 RPA4Q13156 261 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 LTB4RQ15722 352 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 CST6Q15828 149 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 BAK1Q16611 211 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 C6orf183Q5T699 404 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 ZNF367Q7RTV3 350 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 TBC1D19Q8N5T2 526 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 ZFP41Q8N8Y5 198 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 OR52E1Q8NGJ3 308 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 SUN3Q8TAQ9 357 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 GANCQ8TET4 914 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 BBS4Q96RK4 519 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 KXD1Q9BQD3 176 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 TSSK6Q9BXA6 273 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 DDX31Q9H8H2 851 aaKnown RBP10.19□□□□□ -0.78
VPS52-217ENST00000478934 CPNE5Q9HCH3 593 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 SLC35C2Q9NQQ7 365 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 THAP10Q9P2Z0 257 aaPredicted RBP10.19□□□□□ -0.78
VPS52-217ENST00000478934 IL20RAQ9UHF4 553 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 EFCAB10A6NFE3 127 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 PDZK1P1A8MUH7 402 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 H3BQ06 376 aaPredicted RBP10.19□□□□□ -0.78
VPS52-217ENST00000478934 ASNA1O43681 348 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 ADAP00813 363 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 CXCR2P25025 360 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 PEBP1P30086 187 aaKnown RBP10.19□□□□□ -0.78
VPS52-217ENST00000478934 ZNF45Q02386 682 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 PRKCDQ05655 676 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 CDC20Q12834 499 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 ILKQ13418 452 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 KRT33BQ14525 404 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 FBXO43Q4G163 708 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 OR2G6Q5TZ20 316 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 OR4K5Q8NGD3 323 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 KAT2AQ92830 837 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 DMRTB1Q96MA1 342 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 FUZQ9BT04 418 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 POLR2J2Q9GZM3 115 aaKnown RBP10.19□□□□□ -0.78
VPS52-217ENST00000478934 MKRN2Q9H000 416 aaKnown RBP10.19□□□□□ -0.78
VPS52-217ENST00000478934 NEUROD4Q9HD90 331 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 POLMQ9NP87 494 aaPredicted RBP10.19□□□□□ -0.78
VPS52-217ENST00000478934 CCDC59Q9P031 241 aaKnown RBP10.19□□□□□ -0.78
VPS52-217ENST00000478934 TBC1D24Q9ULP9 559 aa10.19□□□□□ -0.78
VPS52-217ENST00000478934 LAMA1P25391 3075 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 MUC22E2RYF6 1773 aaPredicted RBP10.18□□□□□ -0.78
VPS52-217ENST00000478934 MAN2B1O00754 1011 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 SLC31A1O15431 190 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 UGT2B17O75795 530 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 TIE1P35590 1138 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 CD79BP40259 229 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 CLDN2P57739 230 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 GINS1Q14691 196 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 ARHGAP19Q14CB8 494 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 EIF4HQ15056 248 aaKnown RBP10.18□□□□□ -0.78
VPS52-217ENST00000478934 PDGFRLQ15198 375 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 GPAT3Q53EU6 434 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 CLEC12AQ5QGZ9 265 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 SLX4IPQ5VYV7 408 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 CASP12Q6UXS9 341 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 VRK2Q86Y07 508 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 KIF18BQ86Y91 864 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 ACOT4Q8N9L9 421 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 CRELD1Q96HD1 420 aa10.18□□□□□ -0.78
VPS52-217ENST00000478934 TRNT1Q96Q11 434 aaKnown RBP10.18□□□□□ -0.78
VPS52-217ENST00000478934 TAPBPLQ9BX59 468 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms