RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 PTPRJQ12913 1337 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 NOTOA8MTQ0 251 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 H0YAE9 185 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 CILPO75339 1184 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 KCNK2O95069 426 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 PNPP00491 289 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 ESR1P03372 595 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 ABHD2P08910 425 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 CSF1P09603 554 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 ARP10275 920 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 KCNA6P17658 529 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 KIR2DL1P43626 348 aaPredicted RBP5.21□□□□□ -1.58
USF3-202ENST00000478658 KIR2DL2P43627 348 aaPredicted RBP5.21□□□□□ -1.58
USF3-202ENST00000478658 ATP1B3P54709 279 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 OR12D2P58182 307 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 POU6F1Q14863 301 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 CRTC2Q53ET0 693 aaPredicted RBP5.21□□□□□ -1.58
USF3-202ENST00000478658 HENMT1Q5T8I9 393 aaKnown RBP5.21□□□□□ -1.58
USF3-202ENST00000478658 ERASQ7Z444 233 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 GALNT5Q7Z7M9 940 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 FAM185AQ8N0U4 392 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 AENQ8WTP8 325 aaKnown RBP5.21□□□□□ -1.58
USF3-202ENST00000478658 EDEM1Q92611 657 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 CCDC74AQ96AQ1 378 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 LINGO1Q96FE5 620 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 ZSWIM1Q9BR11 485 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 C11orf84Q9BUA3 381 aaPredicted RBP5.21□□□□□ -1.58
USF3-202ENST00000478658 ABCG8Q9H221 673 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.21□□□□□ -1.58
USF3-202ENST00000478658 ZNF331Q9NQX6 463 aaPredicted RBP5.21□□□□□ -1.58
USF3-202ENST00000478658 POLHQ9Y253 713 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 PPLO60437 1756 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 TEX50A0A1B0GTY4 177 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 TRABD2BA6NFA1 517 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 SGK494L7N484 410 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 SCGB1D1O95968 90 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 TK1P04183 234 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 CFIP05156 583 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 DLDP09622 509 aaKnown RBP5.21□□□□□ -1.58
USF3-202ENST00000478658 BDKRB2P30411 391 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 SNCAP37840 140 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 DCTP40126 519 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 RFX5P48382 616 aaPredicted RBP5.21□□□□□ -1.58
USF3-202ENST00000478658 TIMM10P62072 90 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 ZNF616Q08AN1 781 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 ZACNQ401N2 412 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 SLC8B1Q6J4K2 584 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 DHRS11Q6UWP2 260 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 PGAM5Q96HS1 289 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 SGK494Q96LW2 274 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 IP6K3Q96PC2 410 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 C1orf21Q9H246 121 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 C11orf49Q9H6J7 331 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 LRRC19Q9H756 370 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 ELOVL3Q9HB03 270 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 SMPD3Q9NY59 655 aaPredicted RBP5.21□□□□□ -1.58
USF3-202ENST00000478658 SH3BGRL2Q9UJC5 107 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 SLC22A7Q9Y694 548 aa5.21□□□□□ -1.58
USF3-202ENST00000478658 TOPBP1Q92547 1522 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 TLR4O00206 839 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 RAD1O60671 282 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 MITFO75030 526 aaPredicted RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 MT-ND4P03905 459 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 HLA-EP13747 358 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 NMBRP28336 390 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 CALCRP30988 508 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 ARHGAP1Q07960 439 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 N4BP2L1Q5TBK1 243 aaPredicted RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 ABHD17CQ6PCB6 329 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 FAM198BQ6UWH4 519 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 C5orf46Q6UWT4 87 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 IL20RBQ6UXL0 311 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 NIPA1Q7RTP0 329 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 CILP2Q8IUL8 1156 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 TMEM151BQ8IW70 566 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 C4orf33Q8N1A6 199 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 OR1L1Q8NH94 360 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 SFXN5Q8TD22 340 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 IGFLR1Q9H665 355 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 PCDHGC4Q9Y5F7 938 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 A0A0U1RQJ8 604 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 F5H423 210 aaPredicted RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 DFFBO76075 338 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 ADAP00813 363 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 NCBP2P52298 156 aaKnown RBP eCLIP5.2□□□□□ -1.58
USF3-202ENST00000478658 ABHD17BQ5VST6 288 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 FAM205BPQ63HN1 556 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 KANK2Q63ZY3 851 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 OR2T34Q8NGX1 318 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 OR2T3Q8NH03 318 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 OR4L1Q8NH43 312 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 OR56B4Q8NH76 319 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 ZNF431Q8TF32 576 aaPredicted RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 NUDT11Q96G61 164 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 MICU1Q9BPX6 476 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 WDR61Q9GZS3 305 aaKnown RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 ENKD1Q9H0I2 346 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 RHOJQ9H4E5 214 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 UFSP2Q9NUQ7 469 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 SLC1A7O00341 560 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms