RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 RHOXF2BP0C7M4 288 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 CTAGE8P0CG41 777 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 GPX3P22352 226 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 ABCD3P28288 659 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 TIMP3P35625 211 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 KIR2DL3P43628 341 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 CDK9P50750 372 aaKnown RBP13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 PLCXD2Q0VAA5 305 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 CSTF3Q12996 717 aaKnown RBP13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 SNTA1Q13424 505 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 RASA2Q15283 850 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 ACSF3Q4G176 576 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 SGO1Q5FBB7 561 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 SLC30A6Q6NXT4 461 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 TMEM81Q6P7N7 255 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 KIF18BQ86Y91 864 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 CTAGE4Q8IX94 777 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 PLD6Q8N2A8 252 aaKnown RBP13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 C17orf53Q8N3J3 647 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 ZNF615Q8N8J6 731 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 DOK4Q8TEW6 326 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 ZNF483Q8TF39 744 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 NINJ1Q92982 152 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 ERP27Q96DN0 273 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 C16orf45Q96MC5 204 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 C1QTNF3Q9BXJ4 246 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 PRDM14Q9GZV8 571 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 PFDN4Q9NQP4 134 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 ZNF629Q9UEG4 869 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 L3MBTL1Q9Y468 752 aa13.24□□□□□ -0.29
SMARCE1-209ENST00000478349 ADGRG4Q8IZF6 3080 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 POLQO75417 2590 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 LRATO95237 230 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 ACTL6AO96019 429 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 BMP5P22003 454 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 UQCRC1P31930 480 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 KRT20P35900 424 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 ADH7P40394 386 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 CASP3P42574 277 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 ALDH9A1P49189 494 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 CRYZQ08257 329 aaKnown RBP13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 GTF3C1Q12789 2109 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 MAP4K2Q12851 820 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 TESK1Q15569 626 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 ERCC6LQ2NKX8 1250 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 NHSL2Q5HYW2 709 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 NUP54Q7Z3B4 507 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 GBP7Q8N8V2 638 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 CHDHQ8NE62 594 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 OR1J4Q8NGS1 313 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 ADIPOR1Q96A54 375 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 TMCO6Q96DC7 493 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 LCORQ96JN0 433 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 NSUN5Q96P11 429 aaKnown RBP13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 OSBPL11Q9BXB4 747 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 PROK2Q9HC23 129 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 ZBTB26Q9HCK0 441 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 ZNF358Q9NW07 568 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 DNAJB12Q9NXW2 375 aaKnown RBP13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 KLRF1Q9NZS2 232 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 SENP1Q9P0U3 644 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 VPS29Q9UBQ0 182 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 CAMK2AQ9UQM7 478 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 PDZD2O15018 2839 aa13.23□□□□□ -0.29
SMARCE1-209ENST00000478349 F8P00451 2351 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 WASHC1A8K0Z3 465 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 A8MT66 165 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 SYT5O00445 386 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 GOSR1O95249 250 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 PDYNP01213 254 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 CT62P0C5K7 136 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 HMOX2P30519 316 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 GSTM5P46439 218 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 MRPS22P82650 360 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 PRICKLE4Q2TBC4 344 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 SPIN4Q56A73 249 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 TEX35Q5T0J7 233 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 NSUN5P2Q63ZY6 315 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 TIGD3Q6B0B8 471 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 ENPP6Q6UWR7 440 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 TMEM64Q6YI46 380 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 SLC22A9Q8IVM8 553 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 FAM222BQ8WU58 562 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 ZNF592Q92610 1267 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 RNASE6Q93091 150 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 RMND5BQ96G75 393 aaPredicted RBP13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 TIMP4Q99727 224 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 ITPAQ9BY32 194 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 POLDIP3Q9BY77 421 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 NXF5Q9H1B4 397 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 UBQLN3Q9H347 655 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 ACBD3Q9H3P7 528 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 MAT2BQ9NZL9 334 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 MCM8Q9UJA3 840 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 UTS2RQ9UKP6 389 aa13.22□□□□□ -0.29
SMARCE1-209ENST00000478349 ANKRD17O75179 2603 aaKnown RBP13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 GNG14A0A1W2PPG7 69 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 FRG2CA6NGY1 282 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 CD8B2A6NJW9 211 aa13.21□□□□□ -0.29
SMARCE1-209ENST00000478349 KIF2AO00139 706 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms