RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 ICA1LQ8NDH6 482 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 OR9Q2Q8NGE9 314 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 OR52M1Q8NGK5 317 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 OR5M9Q8NGP3 310 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 PINX1Q96BK5 328 aaKnown RBP3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 C4orf36Q96KX1 117 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 VPS35Q96QK1 796 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 ATOH8Q96SQ7 321 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 SYT15Q9BQS2 421 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 DCTN5Q9BTE1 182 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 ZSCAN5AQ9BUG6 496 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 GSDMCQ9BYG8 508 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 TRIM15Q9C019 465 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 KAT8Q9H7Z6 458 aaKnown RBP3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 PLEKHA3Q9HB20 300 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 EXTL2Q9UBQ6 330 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 KLK11Q9UBX7 282 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 BAIAP2L1Q9UHR4 511 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 LNPEPQ9UIQ6 1025 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 PPP1R3CQ9UQK1 317 aa3.79□□□□□ -1.8
SOX2-OT-207ENST00000476964 IGLV7-46A0A075B6I9 117 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 A0A0J9YWU9 116 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 NEDD8-MDP1E9PL57 170 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 K7EQM0 130 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 MAGEB3O15480 346 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 BUB1O43683 1085 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 IGHEP01854 428 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 CSF2P04141 144 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 FCER2P06734 321 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 GSTT2P0CG29 244 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 GSTT2BP0CG30 244 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 TSFMP43897 325 aaKnown RBP3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 NOP14P78316 857 aaKnown RBP3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 DHODHQ02127 395 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 GUCY2DQ02846 1103 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 CHIT1Q13231 466 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 RIPK1Q13546 671 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 EXOSC2Q13868 293 aaKnown RBP3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 MTF1Q14872 753 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 FAM189A2Q15884 450 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 PDK4Q16654 411 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 PARP6Q2NL67 630 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 CCDC152Q4G0S7 254 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 CENPPQ6IPU0 288 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 NEPROQ6NW34 567 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 BLOC1S2Q6QNY1 142 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 LPCAT2Q7L5N7 544 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 LHFPL4Q7Z7J7 247 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 GTSCR1Q86UQ5 136 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 VASH2Q86V25 355 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 CENPSQ8N2Z9 138 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 ARFGAP2Q8N6H7 521 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 SLC5A11Q8WWX8 675 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 HPDLQ96IR7 371 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 TSPAN18Q96SJ8 248 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 ZNF607Q96SK3 696 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 RBM4BQ9BQ04 359 aaKnown RBP3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 WRAP53Q9BUR4 548 aaKnown RBP3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 RAB11FIP5Q9BXF6 653 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 DGCR6LQ9BY27 220 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 MRPL13Q9BYD1 178 aaKnown RBP3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 PUS3Q9BZE2 481 aaKnown RBP3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 POLR1EQ9GZS1 481 aaKnown RBP3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 RPAP3Q9H6T3 665 aaPredicted RBP3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 COG4Q9H9E3 785 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 SMPD3Q9NY59 655 aaPredicted RBP3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 NLGN3Q9NZ94 848 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 PAK5Q9P286 719 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 FZR1Q9UM11 496 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 WIPI2Q9Y4P8 454 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 KLF2Q9Y5W3 355 aaPredicted RBP3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 NOTCH3Q9UM47 2321 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 CUX2O14529 1486 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 PTPRUQ92729 1446 aa3.78□□□□□ -1.8
SOX2-OT-207ENST00000476964 SF3B1O75533 1304 aaKnown RBP eCLIP3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 LOC390937A0A1W2PQ73 354 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 SDHDO14521 159 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 TBX19O60806 448 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 CRLF1O75462 422 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 STK17BO94768 372 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 KIAA0754O94854 1291 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 SORBS2O94875 1100 aaKnown RBP3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 NXPH2O95156 264 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 PAX7P23759 505 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 PBLDP30039 288 aaPredicted RBP3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 TRIM23P36406 574 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 HTR5AP47898 357 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 SGSHP51688 502 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 NDST1P52848 882 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 METAP1P53582 386 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 HERVK_113P63132 956 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 ERVK-8P63133 956 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 NAAAQ02083 359 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 GPM6BQ13491 265 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 SLC17A1Q14916 467 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 ZSWIM7Q19AV6 140 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 SGSM1Q2NKQ1 1148 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 HKDC1Q2TB90 917 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 ANKRD55Q3KP44 614 aa3.77□□□□□ -1.81
SOX2-OT-207ENST00000476964 LRIT3Q3SXY7 679 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms