RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 RILPQ96NA2 401 aa6.59□□□□□ -1.35
UBE4B-208ENST00000475795 ALPK1Q96QP1 1244 aa6.59□□□□□ -1.35
UBE4B-208ENST00000475795 SECISBP2Q96T21 854 aaKnown RBP6.59□□□□□ -1.35
UBE4B-208ENST00000475795 TIMP4Q99727 224 aa6.59□□□□□ -1.35
UBE4B-208ENST00000475795 ANGPTL4Q9BY76 406 aa6.59□□□□□ -1.35
UBE4B-208ENST00000475795 GRIP2Q9C0E4 1043 aa6.59□□□□□ -1.35
UBE4B-208ENST00000475795 PRDM14Q9GZV8 571 aa6.59□□□□□ -1.35
UBE4B-208ENST00000475795 CXorf21Q9HAI6 301 aa6.59□□□□□ -1.35
UBE4B-208ENST00000475795 ZNF629Q9UEG4 869 aaPredicted RBP6.59□□□□□ -1.35
UBE4B-208ENST00000475795 MTRF1LQ9UGC7 380 aaKnown RBP6.59□□□□□ -1.35
UBE4B-208ENST00000475795 FOXD3Q9UJU5 478 aaPredicted RBP6.59□□□□□ -1.35
UBE4B-208ENST00000475795 CBLCQ9ULV8 474 aa6.59□□□□□ -1.35
UBE4B-208ENST00000475795 EDARQ9UNE0 448 aa6.59□□□□□ -1.35
UBE4B-208ENST00000475795 PLEKHA6Q9Y2H5 1048 aa6.59□□□□□ -1.35
UBE4B-208ENST00000475795 C15orf41Q9Y2V0 281 aa6.59□□□□□ -1.35
UBE4B-208ENST00000475795 ACOT9Q9Y305 439 aa6.59□□□□□ -1.35
UBE4B-208ENST00000475795 NPFFR2Q9Y5X5 522 aa6.59□□□□□ -1.35
UBE4B-208ENST00000475795 NF1P21359 2839 aa6.59□□□□□ -1.35
UBE4B-208ENST00000475795 PCNX3Q9H6A9 2034 aa6.59□□□□□ -1.36
UBE4B-208ENST00000475795 A0A1W2PS29 197 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 HMX2A2RU54 273 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 SLC35F4A4IF30 521 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 MBD3L4A6NDZ8 208 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-208ENST00000475795 MBD3L3A6NE82 208 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-208ENST00000475795 MBD3L5A6NJ08 208 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-208ENST00000475795 CD8B2A6NJW9 211 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 PGRMC2O15173 223 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 TRAPPC6AO75865 159 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 KLHL2O95198 593 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 ACSL3O95573 720 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 GBAP04062 536 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 C2P06681 752 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 TACR1P25103 407 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 PIK3R1P27986 724 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 CASP3P42574 277 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 MAGEA4P43358 317 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 PIK3CGP48736 1102 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 MASP1P48740 699 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 NEK2P51955 445 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 PLTPP55058 493 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 NRG3P56975 720 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 RPP38P78345 283 aaKnown RBP6.58□□□□□ -1.36
UBE4B-208ENST00000475795 GUCY2DQ02846 1103 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 CAV1Q03135 178 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 C2orf54Q08AI8 447 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 FOXD4Q12950 439 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-208ENST00000475795 DAZAP2Q15038 168 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-208ENST00000475795 SF3B4Q15427 424 aaKnown RBP eCLIP6.58□□□□□ -1.365e-6■■■■□ 26.7
UBE4B-208ENST00000475795 FAM83EQ2M2I3 478 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 DCST1Q5T197 706 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 MROH9Q5TGP6 573 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 VASNQ6EMK4 673 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 METTL2BQ6P1Q9 378 aaKnown RBP6.58□□□□□ -1.36
UBE4B-208ENST00000475795 PAMR1Q6UXH9 720 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 CAMKMTQ7Z624 323 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 CCDC25Q86WR0 208 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 GALNT12Q8IXK2 581 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 ZNF615Q8N8J6 731 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 C17orf47Q8NEP4 570 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 SPATA4Q8NEY3 305 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 OR7G1Q8NGA0 311 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 GOT1L1Q8NHS2 421 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-208ENST00000475795 MBD3L2Q8NHZ7 208 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-208ENST00000475795 FBXO25Q8TCJ0 367 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 NTNG2Q96CW9 530 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 MBD6Q96DN6 1003 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 WDYHV1Q96HA8 205 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 GNRHR2Q96P88 292 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 SERPINI1Q99574 410 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 UGT2B28Q9BY64 529 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 OR10A5Q9H207 317 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 IPPKQ9H8X2 491 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 CALHM2Q9HA72 323 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 GRPEL1Q9HAV7 217 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 DLL4Q9NR61 685 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 TEX10Q9NXF1 929 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-208ENST00000475795 ADAM29Q9UKF5 820 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 CAMK2AQ9UQM7 478 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 SLC6A5Q9Y345 797 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 UTP11Q9Y3A2 253 aaKnown RBP6.58□□□□□ -1.36
UBE4B-208ENST00000475795 RNF11Q9Y3C5 154 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 TNPO3Q9Y5L0 923 aaKnown RBP6.58□□□□□ -1.36
UBE4B-208ENST00000475795 HEATR5AQ86XA9 2040 aa6.58□□□□□ -1.36
UBE4B-208ENST00000475795 MAP1AP78559 2803 aaPredicted RBP6.57□□□□□ -1.36
UBE4B-208ENST00000475795 A0A096LPK6 155 aa6.57□□□□□ -1.36
UBE4B-208ENST00000475795 TUBAL3A6NHL2 446 aa6.57□□□□□ -1.36
UBE4B-208ENST00000475795 OR7A17O14581 309 aa6.57□□□□□ -1.36
UBE4B-208ENST00000475795 GNB5O14775 395 aa6.57□□□□□ -1.36
UBE4B-208ENST00000475795 CDH16O75309 829 aa6.57□□□□□ -1.36
UBE4B-208ENST00000475795 GOSR1O95249 250 aa6.57□□□□□ -1.36
UBE4B-208ENST00000475795 SIX3O95343 332 aaPredicted RBP6.57□□□□□ -1.36
UBE4B-208ENST00000475795 CLDN9O95484 217 aa6.57□□□□□ -1.36
UBE4B-208ENST00000475795 IL18BPO95998 194 aa6.57□□□□□ -1.36
UBE4B-208ENST00000475795 RAF1P04049 648 aa6.57□□□□□ -1.36
UBE4B-208ENST00000475795 ABCB1P08183 1280 aaPredicted RBP6.57□□□□□ -1.36
UBE4B-208ENST00000475795 EPXP11678 715 aa6.57□□□□□ -1.36
UBE4B-208ENST00000475795 CPMP14384 443 aa6.57□□□□□ -1.36
UBE4B-208ENST00000475795 HOXB4P17483 251 aaPredicted RBP6.57□□□□□ -1.36
UBE4B-208ENST00000475795 BMP7P18075 431 aa6.57□□□□□ -1.36
UBE4B-208ENST00000475795 KRT15P19012 456 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms