RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 GRIN2BQ13224 1484 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 POGZQ7Z3K3 1410 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 IGKV3D-20A0A0C4DH25 116 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 IGHV3-16A0A0C4DH30 117 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 RNF103-CHMP3A0A140T963 221 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 TMEM89A2RUT3 159 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 KRT87PA6NCN2 255 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 SH3BGRLO75368 114 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 GAP43P17677 238 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 MATKP42679 507 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 NUMBP49757 651 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 RAG2P55895 527 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 ZFP36L1Q07352 338 aaKnown RBP3.29□□□□□ -1.88
SDHB-204ENST00000475049 SLC1A5Q15758 541 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 HAGHQ16775 308 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 SHROOM1Q2M3G4 852 aaPredicted RBP3.29□□□□□ -1.88
SDHB-204ENST00000475049 HERC4Q5GLZ8 1057 aaPredicted RBP3.29□□□□□ -1.88
SDHB-204ENST00000475049 ZNF506Q5JVG8 444 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 LIPKQ5VXJ0 399 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 APOOLQ6UXV4 268 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 GPR142Q7Z601 462 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 YRDCQ86U90 279 aaKnown RBP3.29□□□□□ -1.88
SDHB-204ENST00000475049 POM121L12Q8N7R1 296 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 COLGALT1Q8NBJ5 622 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 OR8H1Q8NGG4 311 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 RAB3CQ96E17 227 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 FTHL17Q9BXU8 183 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 NLNQ9BYT8 704 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 CLIP2Q9UDT6 1046 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 IKZF3Q9UKT9 509 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 MRPL11Q9Y3B7 192 aaKnown RBP3.29□□□□□ -1.88
SDHB-204ENST00000475049 ZNF175Q9Y473 711 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 ATG4BQ9Y4P1 393 aa3.29□□□□□ -1.88
SDHB-204ENST00000475049 GPRASP1Q5JY77 1395 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 NPC1L1Q9UHC9 1359 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 CAMTA1Q9Y6Y1 1673 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 A0A0J9YVX5 310 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 A0A1W2PPR1 153 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 CYSRT1A8MQ03 144 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 CYB561D2O14569 222 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 EI24O14681 340 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 MCF2LO15068 1137 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 ARPC1BO15143 372 aaKnown RBP3.28□□□□□ -1.88
SDHB-204ENST00000475049 LRRTM2O43300 516 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 SEC22BO75396 215 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 SEMA4FO95754 770 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 HPP00738 406 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 HCKP08631 526 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 CCDC159P0C7I6 412 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 ETS1P14921 441 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 GATA1P15976 413 aaPredicted RBP3.28□□□□□ -1.88
SDHB-204ENST00000475049 IL4RP24394 825 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 AKT2P31751 481 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 TRIM23P36406 574 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 BRCC3P46736 316 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 PGFP49763 221 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 MYBPC1Q00872 1141 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 CYLC2Q14093 348 aaPredicted RBP3.28□□□□□ -1.88
SDHB-204ENST00000475049 CRMP1Q14194 572 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 HIGD2BQ4VC39 106 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 SEL1L3Q68CR1 1132 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 RHBDD2Q6NTF9 364 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 CNSTQ6PJW8 725 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 REG3GQ6UW15 175 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 C1orf186Q6ZWK4 172 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 ZNF619Q8N2I2 560 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 KDM8Q8N371 416 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 GPATCH11Q8N954 259 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 U2AF1L4Q8WU68 220 aaKnown RBP3.28□□□□□ -1.88
SDHB-204ENST00000475049 CAPNS2Q96L46 248 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 ACCSQ96QU6 501 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 CBWD1Q9BRT8 395 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 RPP25Q9BUL9 199 aaKnown RBP3.28□□□□□ -1.88
SDHB-204ENST00000475049 NRN1Q9NPD7 142 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 ABCC13Q9NSE7 274 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 SPASTQ9UBP0 616 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 LHX3Q9UBR4 397 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 HOOK1Q9UJC3 728 aaKnown RBP3.28□□□□□ -1.88
SDHB-204ENST00000475049 WDR97A6NE52 1622 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 ABCC8Q09428 1581 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 PEG3Q9GZU2 1588 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 CACNA1AO00555 2505 aa3.28□□□□□ -1.88
SDHB-204ENST00000475049 CAMSAP1Q5T5Y3 1602 aa3.27□□□□□ -1.89
SDHB-204ENST00000475049 FOXI3A8MTJ6 420 aaPredicted RBP3.27□□□□□ -1.89
SDHB-204ENST00000475049 E9PAM4 449 aa3.27□□□□□ -1.89
SDHB-204ENST00000475049 PHF1O43189 567 aaPredicted RBP3.27□□□□□ -1.89
SDHB-204ENST00000475049 SSX5O60225 188 aa3.27□□□□□ -1.89
SDHB-204ENST00000475049 PDGFBP01127 241 aaPredicted RBP3.27□□□□□ -1.89
SDHB-204ENST00000475049 CXCL10P02778 98 aa3.27□□□□□ -1.89
SDHB-204ENST00000475049 ACP1P24666 158 aa3.27□□□□□ -1.89
SDHB-204ENST00000475049 UCP1P25874 307 aa3.27□□□□□ -1.89
SDHB-204ENST00000475049 PRDX6P30041 224 aa3.27□□□□□ -1.89
SDHB-204ENST00000475049 SLC26A5P58743 744 aa3.27□□□□□ -1.89
SDHB-204ENST00000475049 TRA2BP62995 288 aaKnown RBP3.27□□□□□ -1.89
SDHB-204ENST00000475049 NOP14P78316 857 aaKnown RBP3.27□□□□□ -1.89
SDHB-204ENST00000475049 GAMTQ14353 236 aa3.27□□□□□ -1.89
SDHB-204ENST00000475049 ABRAXAS2Q15018 415 aa3.27□□□□□ -1.89
SDHB-204ENST00000475049 PCK2Q16822 640 aa3.27□□□□□ -1.89
SDHB-204ENST00000475049 ANKRD55Q3KP44 614 aa3.27□□□□□ -1.89
SDHB-204ENST00000475049 AGKQ53H12 422 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms