RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 TRIM23P36406 574 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 CCR8P51685 355 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 RAB8AP61006 207 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 DOC2BQ14184 412 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 ELOAQ14241 798 aaKnown RBP11.76□□□□□ -0.53
RNF220-211ENST00000474956 ANKRD54Q6NXT1 300 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 RAB43Q86YS6 212 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 KRT78Q8N1N4 520 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 OXR1Q8N573 874 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 OR52E1Q8NGJ3 308 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 VANGL1Q8TAA9 524 aaPredicted RBP11.76□□□□□ -0.53
RNF220-211ENST00000474956 CAMK1GQ96NX5 476 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 MAPKAP1Q9BPZ7 522 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 PRR14Q9BWN1 585 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 QRSL1Q9H0R6 528 aaKnown RBP11.76□□□□□ -0.53
RNF220-211ENST00000474956 TRPV4Q9HBA0 871 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 SMURF1Q9HCE7 757 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 ICKQ9UPZ9 632 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 TRBC2A0A5B9 178 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 A6NL46 340 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 NDUFS4O43181 175 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 SCO2O43819 266 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 DDCP20711 480 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 DDOSTP39656 456 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 PRKAG1P54619 331 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 GPR19Q15760 415 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 SYPL1Q16563 259 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 ARMC4Q5T2S8 1044 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 FAM46CQ5VWP2 391 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 GATAD2AQ86YP4 633 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 GPR32P1Q8NGA4 272 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 SETD7Q8WTS6 366 aaKnown RBP11.76□□□□□ -0.53
RNF220-211ENST00000474956 AIF1LQ9BQI0 150 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 MTIF3Q9H2K0 278 aaKnown RBP11.76□□□□□ -0.53
RNF220-211ENST00000474956 CLN6Q9NWW5 311 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 HCN4Q9Y3Q4 1203 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 EGFP01133 1207 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 FEN1P39748 380 aaKnown RBP11.75□□□□□ -0.53
RNF220-211ENST00000474956 MAPK9P45984 424 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 PTGES3Q15185 160 aaKnown RBP11.75□□□□□ -0.53
RNF220-211ENST00000474956 NXNL2Q5VZ03 156 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 PLAG1Q6DJT9 500 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 VASH1Q7L8A9 365 aaPredicted RBP11.75□□□□□ -0.53
RNF220-211ENST00000474956 WDR36Q8NI36 951 aaKnown RBP11.75□□□□□ -0.53
RNF220-211ENST00000474956 TAPBPLQ9BX59 468 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 MARCH7Q9H992 704 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 TMEM74BQ9NUR3 256 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 RGS5O15539 181 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 RNGTTO60942 597 aaKnown RBP11.75□□□□□ -0.53
RNF220-211ENST00000474956 DNAJB6O75190 326 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 GPX5O75715 221 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 POU2F2P09086 479 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 DSTNP60981 165 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 REEP5Q00765 189 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 DMPKQ09013 629 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 RBBP4Q09028 425 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 SSX1Q16384 188 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 ITPRIPL2Q3MIP1 535 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 C18orf63Q68DL7 685 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 SIMC1Q8NDZ2 872 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 CREB3L4Q8TEY5 395 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 SMPDL3AQ92484 453 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 TSACCQ96A04 125 aaPredicted RBP11.75□□□□□ -0.53
RNF220-211ENST00000474956 RAB7BQ96AH8 199 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 TMEM19Q96HH6 336 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 ST6GAL2Q96JF0 529 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 DPH7Q9BTV6 452 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 ASPNQ9BXN1 380 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 SLC17A9Q9BYT1 436 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 BTBD1Q9H0C5 482 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 CLEC1BQ9P126 229 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 TRBV4-1A0A0J9YWV2 114 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 A0A1W2PQF6 199 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 ERAL1O75616 437 aaKnown RBP11.75□□□□□ -0.53
RNF220-211ENST00000474956 SEMA3DO95025 777 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 CCNB2O95067 398 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 CXCR2P25025 360 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 ADPRHP54922 357 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 PCBP3P57721 371 aaKnown RBP11.75□□□□□ -0.53
RNF220-211ENST00000474956 HYAL2Q12891 473 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 SGCGQ13326 291 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 KRT33BQ14525 404 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 CDK10Q15131 360 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 GDPGP1Q6ZNW5 385 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 PTCHD4Q6ZW05 846 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 IL17RCQ8NAC3 791 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 DEPDC7Q96QD5 511 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 TRMT61BQ9BVS5 477 aaKnown RBP11.75□□□□□ -0.53
RNF220-211ENST00000474956 RHBGQ9H310 441 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 C6orf106Q9H6K1 298 aaPredicted RBP11.75□□□□□ -0.53
RNF220-211ENST00000474956 WASH6PQ9NQA3 447 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 ACER3Q9NUN7 267 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 TBC1D29Q9UFV1 150 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 FBXW2Q9UKT8 454 aa11.75□□□□□ -0.53
RNF220-211ENST00000474956 HMGN4O00479 90 aa11.74□□□□□ -0.53
RNF220-211ENST00000474956 PDPK1O15530 556 aa11.74□□□□□ -0.53
RNF220-211ENST00000474956 SH3BP5O60239 455 aa11.74□□□□□ -0.53
RNF220-211ENST00000474956 SOX14O95416 240 aa11.74□□□□□ -0.53
RNF220-211ENST00000474956 TRAPPC2P0DI81 140 aa11.74□□□□□ -0.53
RNF220-211ENST00000474956 TRAPPC2BP0DI82 140 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms