RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 FRMPD2BQ6IN97 320 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 MFSD12Q6NUT3 480 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 CDC73Q6P1J9 531 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 CD300LDQ6UXZ3 194 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 Q6ZPB1 254 aaPredicted RBP9.22□□□□□ -0.93
USP39-214ENST00000474572 ABHD13Q7L211 337 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 DGLUCYQ7Z3D6 616 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 PARGQ86W56 976 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 OOSP2Q86WS3 158 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 CCDC103Q8IW40 242 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 SLC44A2Q8IWA5 706 aaPredicted RBP9.22□□□□□ -0.93
USP39-214ENST00000474572 TAGAPQ8N103 731 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 OR2L13Q8N349 312 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 LRRC25Q8N386 305 aaPredicted RBP9.22□□□□□ -0.93
USP39-214ENST00000474572 DNAJC22Q8N4W6 341 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 LINC00471Q8N535 108 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 OR9A2Q8NGT5 310 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 OR52J3Q8NH60 311 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 FAM81AQ8TBF8 368 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 GAB3Q8WWW8 586 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 FCGR1BQ92637 280 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 UBE2FQ969M7 185 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 C16orf58Q96GQ5 468 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 PRRC1Q96M27 445 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 MS4A4EQ96PG1 132 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 TRNT1Q96Q11 434 aaKnown RBP9.22□□□□□ -0.93
USP39-214ENST00000474572 CSF3RQ99062 836 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 WFDC6Q9BQY6 131 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 FUNDC2Q9BWH2 189 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 GPR174Q9BXC1 333 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 ACTRT3Q9BYD9 372 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 PCED1AQ9H1Q7 454 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 UBE2ZQ9H832 354 aaPredicted RBP9.22□□□□□ -0.93
USP39-214ENST00000474572 ACOT13Q9NPJ3 140 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 PTGFRNQ9P2B2 879 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 TRPC4Q9UBN4 977 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 AASSQ9UDR5 926 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 POMT2Q9UKY4 750 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 DUSP12Q9UNI6 340 aa9.22□□□□□ -0.93
USP39-214ENST00000474572 A0A087WV62 115 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 LOC105369274A0A096LPK9 316 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 LOC102723532A0A0G2JNH3 316 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 A0A1W2PPW3 197 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 A0A1W2PR77 199 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 SH3PXD2BA1X283 911 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 PTGES3LE9PB15 166 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 MPZL2O60487 215 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 ZNF217O75362 1048 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 INMTO95050 263 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 AGR2O95994 175 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 TP53P04637 393 aaPredicted RBP9.21□□□□□ -0.94
USP39-214ENST00000474572 ALPPL2P10696 532 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 OSMP13725 252 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 CHMP24386 653 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 FZD5Q13467 585 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 PTGES3Q15185 160 aaKnown RBP9.21□□□□□ -0.94
USP39-214ENST00000474572 SEC23BQ15437 767 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 TCEA2Q15560 299 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 LTB4RQ15722 352 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 SMAD2Q15796 467 aaKnown RBP9.21□□□□□ -0.94
USP39-214ENST00000474572 ZNF628Q5EBL2 1059 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 TMEM201Q5SNT2 666 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 SLX4IPQ5VYV7 408 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 AP1ARQ63HQ0 302 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 C12orf73Q69YU5 71 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 PGBD2Q6P3X8 592 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 FAM111BQ6SJ93 734 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 RBM45Q8IUH3 476 aaKnown RBP9.21□□□□□ -0.94
USP39-214ENST00000474572 P3H2Q8IVL5 708 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 OR4N4Q8N0Y3 316 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 ZNF655Q8N720 491 aaPredicted RBP9.21□□□□□ -0.94
USP39-214ENST00000474572 ZNF540Q8NDQ6 660 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 FLCNQ8NFG4 579 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 OR7G2Q8NG99 324 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 OR4K14Q8NGD5 310 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 OR10G6Q8NH81 332 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 ZCCHC10Q8TBK6 192 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 RORBQ92753 470 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 HOXB13Q92826 284 aaPredicted RBP9.21□□□□□ -0.94
USP39-214ENST00000474572 TANKQ92844 425 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 KLHDC7BQ96G42 594 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 SLC6A18Q96N87 628 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 RHNO1Q9BSD3 238 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 LRRC61Q9BV99 259 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 UCK1Q9HA47 277 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 MAN2C1Q9NTJ4 1040 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 RHCGQ9UBD6 479 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 TMCC3Q9ULS5 477 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 SLC9A8Q9Y2E8 581 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 MRPS2Q9Y399 296 aaKnown RBP9.21□□□□□ -0.94
USP39-214ENST00000474572 CHST2Q9Y4C5 530 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 KCNE3Q9Y6H6 103 aa9.21□□□□□ -0.94
USP39-214ENST00000474572 TP53BP1Q12888 1972 aaPredicted RBP9.21□□□□□ -0.94
USP39-214ENST00000474572 C5orf42Q9H799 3197 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 SH3D21A4FU49 640 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 DUXAA6NLW8 204 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 CLCA1A8K7I4 914 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 FAM227AF5H4B4 570 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 TMX2-CTNND1H3BSU7 103 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 M0R3H8 397 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms