RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SLC9A3P48764 834 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 CAV3P56539 151 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 DHCR24Q15392 516 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 DDI2Q5TDH0 399 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 LAPTM4BQ86VI4 370 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 GDPD1Q8N9F7 314 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 SIMC1Q8NDZ2 872 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 GATAD2BQ8WXI9 593 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 SMPDL3AQ92484 453 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 TM9SF4Q92544 642 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 HHIPL1Q96JK4 782 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 KCTD7Q96MP8 289 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 TM9SF2Q99805 663 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 OR52A5Q9H2C5 316 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 AHSPQ9NZD4 102 aa19.94■□□□□ 0.78
COL18A1-207ENST00000473212 KIF26AQ9ULI4 1882 aaPredicted RBP19.93■□□□□ 0.78
COL18A1-207ENST00000473212 PLA2G10O15496 165 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 PI15O43692 258 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 EPHX1P07099 455 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 SLC6A11P48066 632 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 GIPRP48546 466 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 SMIM11AP58511 58 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 BNC1Q01954 994 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 Q5BKY6 102 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 SNAP47Q5SQN1 464 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 KHDRBS2Q5VWX1 349 aaKnown RBP19.93■□□□□ 0.78
COL18A1-207ENST00000473212 ZNF438Q7Z4V0 828 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 IQCHQ86VS3 1027 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 XAGE5Q8WWM1 108 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 FRMD6Q96NE9 622 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 QRSL1Q9H0R6 528 aaKnown RBP19.93■□□□□ 0.78
COL18A1-207ENST00000473212 OTOL1A6NHN0 477 aaPredicted RBP19.93■□□□□ 0.78
COL18A1-207ENST00000473212 POLR1CO15160 346 aaPredicted RBP19.93■□□□□ 0.78
COL18A1-207ENST00000473212 SERPIND1P05546 499 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 CISD3P0C7P0 127 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 CRTC2Q53ET0 693 aaPredicted RBP19.93■□□□□ 0.78
COL18A1-207ENST00000473212 GRASPQ7Z6J2 395 aaPredicted RBP19.93■□□□□ 0.78
COL18A1-207ENST00000473212 KRT78Q8N1N4 520 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 OR4K5Q8NGD3 323 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 KATNB1Q9BVA0 655 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 LGR4Q9BXB1 951 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 EPHX3Q9H6B9 360 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 RNF121Q9H920 327 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 NEUROD4Q9HD90 331 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 SZT2Q5T011 3432 aa19.93■□□□□ 0.78
COL18A1-207ENST00000473212 A0A1W2PS29 197 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 MYL12AP19105 171 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 WNT4P56705 351 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 ALDH6A1Q02252 535 aaKnown RBP19.92■□□□□ 0.78
COL18A1-207ENST00000473212 SNAPC1Q16533 368 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.92■□□□□ 0.78
COL18A1-207ENST00000473212 DEFB115Q30KQ5 88 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 ZNF750Q32MQ0 723 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 HSDL2Q6YN16 418 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 ATP6V1C2Q8NEY4 427 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 RSPRY1Q96DX4 576 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 FNDC11Q9BVV2 318 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 TMEM245Q9H330 911 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 MAFFQ9ULX9 164 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 NUP210Q8TEM1 1887 aaPredicted RBP19.92■□□□□ 0.78
COL18A1-207ENST00000473212 COL4A3Q01955 1670 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 LATO43561 262 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 EPPINO95925 133 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 YES1P07947 543 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 CCT3P49368 545 aaKnown RBP19.92■□□□□ 0.78
COL18A1-207ENST00000473212 PLK5Q496M5 336 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 NRSN1Q8IZ57 195 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 OR52P1PQ8NH57 321 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 SETD7Q8WTS6 366 aaKnown RBP19.92■□□□□ 0.78
COL18A1-207ENST00000473212 TFGQ92734 400 aaPredicted RBP19.92■□□□□ 0.78
COL18A1-207ENST00000473212 MS4A8Q9BY19 250 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 ZSCAN32Q9NX65 697 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 FBXW2Q9UKT8 454 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 NDRG2Q9UN36 371 aaKnown RBP19.92■□□□□ 0.78
COL18A1-207ENST00000473212 MAU2Q9Y6X3 613 aa19.92■□□□□ 0.78
COL18A1-207ENST00000473212 PTPRSQ13332 1948 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 SNRNP200O75643 2136 aaKnown RBP19.91■□□□□ 0.78
COL18A1-207ENST00000473212 ABHD14A-ACY1A0A1B0GW23 586 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 A0A1W2PRQ8 180 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 LCMT2O60294 686 aaKnown RBP19.91■□□□□ 0.78
COL18A1-207ENST00000473212 ALPPP05187 535 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 CEBPBP17676 345 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 PPM1AP35813 382 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 PCBP4P57723 403 aaKnown RBP19.91■□□□□ 0.78
COL18A1-207ENST00000473212 SHFQ7M4L6 423 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 PDZD3Q86UT5 571 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 OR2L2Q8NH16 312 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 RASSF5Q8WWW0 418 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 PLA2G12AQ9BZM1 189 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 ANKRA2Q9H9E1 313 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 GPR52Q9Y2T5 361 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 SEC14L5O43304 696 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 NR2F6P10588 404 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 HOXB3P14651 431 aaPredicted RBP19.91■□□□□ 0.78
COL18A1-207ENST00000473212 EPCAMP16422 314 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 DDX5P17844 614 aaKnown RBP19.91■□□□□ 0.78
COL18A1-207ENST00000473212 PRKAG1P54619 331 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 GAS1P54826 345 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 UBE3DQ7Z6J8 389 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 TBC1D19Q8N5T2 526 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms