RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ANKRD49Q8WVL7 239 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 CAVIN3Q969G5 261 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 ACTR8Q9H981 624 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 CNOT10Q9H9A5 744 aaKnown RBP17.2■□□□□ 0.34
SORT1-203ENST00000471996 PRM3Q9NNZ6 103 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 PTBP2Q9UKA9 531 aaKnown RBP17.2■□□□□ 0.34
SORT1-203ENST00000471996 EXO1Q9UQ84 846 aaKnown RBP17.2■□□□□ 0.34
SORT1-203ENST00000471996 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.19■□□□□ 0.34
SORT1-203ENST00000471996 C2orf72A6NCS6 295 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 ICOSLGO75144 302 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 BANF1O75531 89 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 SLC35E2BP0CK96 405 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 SLC35E2P0CK97 266 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 ZNF708P17019 499 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 PTGDSP41222 190 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 BUD31P41223 144 aaPredicted RBP17.19■□□□□ 0.34
SORT1-203ENST00000471996 KIR2DL2P43627 348 aaPredicted RBP17.19■□□□□ 0.34
SORT1-203ENST00000471996 KCNJ5P48544 419 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 HSPA7P48741 367 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 HNRNPH2P55795 449 aaKnown RBP17.19■□□□□ 0.34
SORT1-203ENST00000471996 CLDN18P56856 261 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 IRF8Q02556 426 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 CHIT1Q13231 466 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 ETFDHQ16134 617 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 PDK4Q16654 411 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 FBXO48Q5FWF7 155 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 KHDRBS2Q5VWX1 349 aaKnown RBP17.19■□□□□ 0.34
SORT1-203ENST00000471996 AAGABQ6PD74 315 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 ZNF615Q8N8J6 731 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 WDSUB1Q8N9V3 476 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 RDH11Q8TC12 318 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 ESAMQ96AP7 390 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 CMTM7Q96FZ5 175 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 NAT9Q9BTE0 207 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 OSBPL11Q9BXB4 747 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 CXorf21Q9HAI6 301 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 GALNT9Q9HCQ5 603 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 PSD3Q9NYI0 1048 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 TAS2R10Q9NYW0 307 aa17.19■□□□□ 0.34
SORT1-203ENST00000471996 A8MV72 311 aaPredicted RBP17.18■□□□□ 0.34
SORT1-203ENST00000471996 HAX1O00165 279 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 KLF4O43474 513 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 PPM1BO75688 479 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 STK16O75716 305 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 CGAP01215 116 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 FAM157CP0CG43 387 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 NAGAP17050 411 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 EPORP19235 508 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 GMPRP36959 345 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 ZNF75DP51815 510 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 SNTA1Q13424 505 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 E2F2Q14209 437 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 KRTAP24-1Q3LI83 254 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 DEPDC1Q5TB30 811 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 ANKRD34AQ69YU3 496 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 DESI1Q6ICB0 168 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 IGDCC3Q8IVU1 814 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 PPIL6Q8IXY8 311 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 LAS2Q8IYD9 372 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 ZCCHC7Q8N3Z6 543 aaKnown RBP17.18■□□□□ 0.34
SORT1-203ENST00000471996 HGDQ93099 445 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 UBE2E3Q969T4 207 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 NODALQ96S42 347 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 OR10A5Q9H207 317 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 OR51B5Q9H339 312 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 PLAC1Q9HBJ0 212 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 MED12LQ86YW9 2145 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 ABCA1O95477 2261 aa17.18■□□□□ 0.34
SORT1-203ENST00000471996 FRG2CA6NGY1 282 aa17.17■□□□□ 0.34
SORT1-203ENST00000471996 GLOD5A6NK44 160 aa17.17■□□□□ 0.34
SORT1-203ENST00000471996 HS3ST1O14792 307 aa17.17■□□□□ 0.34
SORT1-203ENST00000471996 PLAUP00749 431 aa17.17■□□□□ 0.34
SORT1-203ENST00000471996 THBDP07204 575 aa17.17■□□□□ 0.34
SORT1-203ENST00000471996 PCNAP12004 261 aa17.17■□□□□ 0.34
SORT1-203ENST00000471996 IDUAP35475 653 aa17.17■□□□□ 0.34
SORT1-203ENST00000471996 TAS2R39P59534 338 aa17.17■□□□□ 0.34
SORT1-203ENST00000471996 NUP54Q7Z3B4 507 aa17.17■□□□□ 0.34
SORT1-203ENST00000471996 MILR1Q7Z6M3 343 aa17.17■□□□□ 0.34
SORT1-203ENST00000471996 MAGOHBQ96A72 148 aaKnown RBP17.17■□□□□ 0.34
SORT1-203ENST00000471996 RGMAQ96B86 450 aa17.17■□□□□ 0.34
SORT1-203ENST00000471996 ZBED6CLQ96FA7 236 aaPredicted RBP17.17■□□□□ 0.34
SORT1-203ENST00000471996 ZNF845Q96IR2 970 aaPredicted RBP17.17■□□□□ 0.34
SORT1-203ENST00000471996 HEY2Q9UBP5 337 aa17.17■□□□□ 0.34
SORT1-203ENST00000471996 ROS1P08922 2347 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 SLC22A20A6NK97 555 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 EMC8O43402 210 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 CT62P0C5K7 136 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 CD8BP10966 210 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 TBXA2RP21731 343 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 SERPINB1P30740 379 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 CXCR5P32302 372 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 RPS4XP62701 263 aaKnown RBP17.16■□□□□ 0.34
SORT1-203ENST00000471996 MSS51Q4VC12 460 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 CDKL4Q5MAI5 379 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 RNASEH2BQ5TBB1 312 aaKnown RBP17.16■□□□□ 0.34
SORT1-203ENST00000471996 SULT1C3Q6IMI6 304 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 MED27Q6P2C8 311 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 TRMT10BQ6PF06 316 aaKnown RBP17.16■□□□□ 0.34
SORT1-203ENST00000471996 CHMP1BQ7LBR1 199 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 GALNT12Q8IXK2 581 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms