RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 DNAJB8Q8NHS0 232 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 C16orf52Q8NHV5 167 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 ZFP28Q8NHY6 868 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 PIWIL2Q8TC59 973 aaKnown RBP14.14□□□□□ -0.15
SDC3-203ENST00000471567 DYDC1Q8WWB3 177 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 ADIPOR1Q96A54 375 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 C7orf26Q96N11 449 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 AMDHD1Q96NU7 426 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 GLIPR2Q9H4G4 154 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 TIMMDC1Q9NPL8 285 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 ACSS1Q9NUB1 689 aaPredicted RBP14.14□□□□□ -0.15
SDC3-203ENST00000471567 ASF1BQ9NVP2 202 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 SH3BP4Q9P0V3 963 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 ERVK-11Q9UQG0 969 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 KLF13Q9Y2Y9 288 aaPredicted RBP14.14□□□□□ -0.15
SDC3-203ENST00000471567 SDHDO14521 159 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 SCAMP2O15127 329 aaKnown RBP14.13□□□□□ -0.15
SDC3-203ENST00000471567 ATP8B1O43520 1251 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 ZNF354AO60765 605 aaPredicted RBP14.13□□□□□ -0.15
SDC3-203ENST00000471567 CRYABP02511 175 aaKnown RBP14.13□□□□□ -0.15
SDC3-203ENST00000471567 G6PDP11413 515 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 GPX3P22352 226 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 PTGER1P34995 402 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 FRKP42685 505 aaPredicted RBP14.13□□□□□ -0.15
SDC3-203ENST00000471567 EMDP50402 254 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 CLDN8P56748 225 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 MRPS35P82673 323 aaKnown RBP14.13□□□□□ -0.15
SDC3-203ENST00000471567 DUSP8Q13202 625 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 PTGR1Q14914 329 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 EXOSC7Q15024 291 aaKnown RBP14.13□□□□□ -0.15
SDC3-203ENST00000471567 MAPKAPK3Q16644 382 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 FHL5Q5TD97 284 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 FAM180AQ6UWF9 173 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 IL20RBQ6UXL0 311 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 RTL4Q6ZR62 310 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 BCORP1Q8N888 145 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 GOLM1Q8NBJ4 401 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 FAM98AQ8NCA5 519 aaKnown RBP14.13□□□□□ -0.15
SDC3-203ENST00000471567 GALNT11Q8NCW6 608 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 OR52R1Q8NGF1 315 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 GRHL3Q8TE85 626 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 FAR1Q8WVX9 515 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 KAT2AQ92830 837 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 ZBED6CLQ96FA7 236 aaPredicted RBP14.13□□□□□ -0.15
SDC3-203ENST00000471567 PRPF18Q99633 342 aaKnown RBP14.13□□□□□ -0.15
SDC3-203ENST00000471567 TRIM4Q9C037 500 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 KLHL1Q9NR64 748 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 ATAD3AQ9NVI7 634 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 MAP10Q9P2G4 905 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 MARCOQ9UEW3 520 aaPredicted RBP14.13□□□□□ -0.15
SDC3-203ENST00000471567 NTNG1Q9Y2I2 539 aa14.13□□□□□ -0.15
SDC3-203ENST00000471567 ASPDHA6ND91 283 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 CAPN14A8MX76 684 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 FBXO45P0C2W1 286 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 KITP10721 976 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 DRD5P21918 477 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 PPICP45877 212 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 NR0B1P51843 470 aaKnown RBP14.12□□□□□ -0.15
SDC3-203ENST00000471567 NRG3P56975 720 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 IGFBP7Q16270 282 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 ZNF791Q3KP31 576 aaPredicted RBP14.12□□□□□ -0.15
SDC3-203ENST00000471567 ZNF385BQ569K4 471 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 CPTPQ5TA50 214 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 ANKRD26P1Q6NSI1 321 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 LYPD8Q6UX82 237 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 GALNTL5Q7Z4T8 443 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 SPATA19Q7Z5L4 167 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 ATCAYQ86WG3 371 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 RIMKLAQ8IXN7 391 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 OR7G2Q8NG99 324 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 CKAP2Q8WWK9 683 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 COQ8BQ96D53 544 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 SPACA9Q96E40 222 aaPredicted RBP14.12□□□□□ -0.15
SDC3-203ENST00000471567 ELP4Q96EB1 424 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 HSPBAP1Q96EW2 488 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 TAAR6Q96RI8 345 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 HES7Q9BYE0 225 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 TAS2R9Q9NYW1 312 aa14.12□□□□□ -0.15
SDC3-203ENST00000471567 C19orf53Q9UNZ5 99 aaPredicted RBP14.12□□□□□ -0.15
SDC3-203ENST00000471567 KLRC4-KLRK1H3BQV0 150 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 ACOX3O15254 700 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 COQ9O75208 318 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 NAGAP17050 411 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 DIO3P55073 304 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 MANFP55145 182 aaKnown RBP14.11□□□□□ -0.15
SDC3-203ENST00000471567 PSPHP78330 225 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 MLC1Q15049 377 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 HSP90B2PQ58FF3 399 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 ZNF324BQ6AW86 544 aaPredicted RBP14.11□□□□□ -0.15
SDC3-203ENST00000471567 RGS9BPQ6ZS82 235 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 MDGA2Q7Z553 956 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 CAMKMTQ7Z624 323 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 OR2L13Q8N349 312 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 POGLUT1Q8NBL1 392 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 PSD4Q8NDX1 1056 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 SIMC1Q8NDZ2 872 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 OR7A2PQ8NGA2 310 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 CIDECQ96AQ7 238 aaPredicted RBP14.11□□□□□ -0.15
SDC3-203ENST00000471567 LCORQ96JN0 433 aaPredicted RBP14.11□□□□□ -0.15
SDC3-203ENST00000471567 MAELQ96JY0 434 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms