RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 OPN1SWP03999 348 aa8.78□□□□□ -1
VPS52-216ENST00000471309 ETS2P15036 469 aa8.78□□□□□ -1
VPS52-216ENST00000471309 ZNF23P17027 643 aa8.78□□□□□ -1
VPS52-216ENST00000471309 CKMT2P17540 419 aa8.78□□□□□ -1
VPS52-216ENST00000471309 NT5EP21589 574 aa8.78□□□□□ -1
VPS52-216ENST00000471309 FBLP22087 321 aaKnown RBP8.78□□□□□ -1
VPS52-216ENST00000471309 GALNSP34059 522 aa8.78□□□□□ -1
VPS52-216ENST00000471309 STT3AP46977 705 aa8.78□□□□□ -1
VPS52-216ENST00000471309 KCNJ10P78508 379 aa8.78□□□□□ -1
VPS52-216ENST00000471309 VLDLRP98155 873 aa8.78□□□□□ -1
VPS52-216ENST00000471309 FUT5Q11128 374 aa8.78□□□□□ -1
VPS52-216ENST00000471309 STX4Q12846 297 aa8.78□□□□□ -1
VPS52-216ENST00000471309 MAP4K2Q12851 820 aa8.78□□□□□ -1
VPS52-216ENST00000471309 BIKQ13323 160 aa8.78□□□□□ -1
VPS52-216ENST00000471309 TRA2AQ13595 282 aaKnown RBP eCLIP8.78□□□□□ -1
VPS52-216ENST00000471309 COL9A2Q14055 689 aaPredicted RBP8.78□□□□□ -1
VPS52-216ENST00000471309 SYT16Q17RD7 645 aa8.78□□□□□ -1
VPS52-216ENST00000471309 IFI44LQ53G44 452 aa8.78□□□□□ -1
VPS52-216ENST00000471309 RPS26P11Q5JNZ5 115 aaPredicted RBP8.78□□□□□ -1
VPS52-216ENST00000471309 ATAD3BQ5T9A4 648 aa8.78□□□□□ -1
VPS52-216ENST00000471309 HEPHL1Q6MZM0 1159 aa8.78□□□□□ -1
VPS52-216ENST00000471309 ZCCHC12Q6PEW1 402 aa8.78□□□□□ -1
VPS52-216ENST00000471309 ZBTB49Q6ZSB9 765 aa8.78□□□□□ -1
VPS52-216ENST00000471309 ARMC8Q8IUR7 673 aa8.78□□□□□ -1
VPS52-216ENST00000471309 SLITRK4Q8IW52 837 aa8.78□□□□□ -1
VPS52-216ENST00000471309 GALNT12Q8IXK2 581 aa8.78□□□□□ -1
VPS52-216ENST00000471309 VWA5B2Q8N398 1253 aa8.78□□□□□ -1
VPS52-216ENST00000471309 SVOPLQ8N434 492 aa8.78□□□□□ -1
VPS52-216ENST00000471309 PIP4P2Q8N4L2 257 aa8.78□□□□□ -1
VPS52-216ENST00000471309 CBR4Q8N4T8 237 aa8.78□□□□□ -1
VPS52-216ENST00000471309 C7orf57Q8NEG2 295 aa8.78□□□□□ -1
VPS52-216ENST00000471309 GEMIN6Q8WXD5 167 aaKnown RBP8.78□□□□□ -1
VPS52-216ENST00000471309 TMBIM1Q969X1 311 aa8.78□□□□□ -1
VPS52-216ENST00000471309 C16orf58Q96GQ5 468 aa8.78□□□□□ -1
VPS52-216ENST00000471309 TPD52L3Q96J77 140 aa8.78□□□□□ -1
VPS52-216ENST00000471309 CNDP2Q96KP4 475 aaKnown RBP8.78□□□□□ -1
VPS52-216ENST00000471309 C7orf34Q96L11 122 aa8.78□□□□□ -1
VPS52-216ENST00000471309 ZNF597Q96LX8 424 aa8.78□□□□□ -1
VPS52-216ENST00000471309 ZNF607Q96SK3 696 aa8.78□□□□□ -1
VPS52-216ENST00000471309 TREX2Q9BQ50 279 aaPredicted RBP8.78□□□□□ -1
VPS52-216ENST00000471309 BTBD2Q9BX70 525 aa8.78□□□□□ -1
VPS52-216ENST00000471309 RUBCNLQ9H714 662 aa8.78□□□□□ -1
VPS52-216ENST00000471309 SYNDIG1Q9H7V2 258 aa8.78□□□□□ -1
VPS52-216ENST00000471309 C11orf16Q9NQ32 467 aa8.78□□□□□ -1
VPS52-216ENST00000471309 EQTNQ9NQ60 294 aa8.78□□□□□ -1
VPS52-216ENST00000471309 THSD1Q9NS62 852 aa8.78□□□□□ -1
VPS52-216ENST00000471309 LANCL2Q9NS86 450 aa8.78□□□□□ -1
VPS52-216ENST00000471309 EXD2Q9NVH0 621 aa8.78□□□□□ -1
VPS52-216ENST00000471309 GIN1Q9NXP7 522 aa8.78□□□□□ -1
VPS52-216ENST00000471309 CALML5Q9NZT1 146 aa8.78□□□□□ -1
VPS52-216ENST00000471309 NDOR1Q9UHB4 597 aa8.78□□□□□ -1
VPS52-216ENST00000471309 BAG5Q9UL15 447 aa8.78□□□□□ -1
VPS52-216ENST00000471309 RAB26Q9ULW5 256 aa8.78□□□□□ -1
VPS52-216ENST00000471309 ABCG2Q9UNQ0 655 aa8.78□□□□□ -1
VPS52-216ENST00000471309 HCN4Q9Y3Q4 1203 aa8.78□□□□□ -1
VPS52-216ENST00000471309 MMACHCQ9Y4U1 282 aa8.78□□□□□ -1
VPS52-216ENST00000471309 CLDN16Q9Y5I7 305 aa8.78□□□□□ -1
VPS52-216ENST00000471309 GPC6Q9Y625 555 aaPredicted RBP8.78□□□□□ -1
VPS52-216ENST00000471309 GON4LQ3T8J9 2241 aa8.78□□□□□ -1
VPS52-216ENST00000471309 DSPPQ9NZW4 1301 aa8.78□□□□□ -1
VPS52-216ENST00000471309 COL27A1Q8IZC6 1860 aaPredicted RBP8.77□□□□□ -1.01
VPS52-216ENST00000471309 A0A0G2JPF8 293 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 FAM86C2PA6NEL3 165 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 PRR33A8MZF0 331 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 HNRNPCL2B2RXH8 293 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 HNRNPCL3B7ZW38 293 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 hCG_2039718K7EN88 272 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 SERPINB7O75635 380 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 MFN2O95140 757 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 LDOC1O95751 146 aaPredicted RBP8.77□□□□□ -1.01
VPS52-216ENST00000471309 CHRM4P08173 479 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 HNRNPCL4P0DMR1 293 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 NR2F1P10589 423 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 UQCRBP14927 111 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 CD247P20963 164 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 ACP1P24666 158 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 SERTAD2Q14140 314 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 SYPL1Q16563 259 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 NRF1Q16656 503 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 IQCCQ4KMZ1 466 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 TRMT12Q53H54 448 aaKnown RBP8.77□□□□□ -1.01
VPS52-216ENST00000471309 OR2T5Q6IEZ7 315 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 RHBDD2Q6NTF9 364 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 QSOX2Q6ZRP7 698 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 C16orf62Q7Z3J2 963 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 BPHLQ86WA6 291 aaPredicted RBP8.77□□□□□ -1.01
VPS52-216ENST00000471309 KRT73Q86Y46 540 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 ZDHHC13Q8IUH4 622 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 SLC44A2Q8IWA5 706 aaPredicted RBP8.77□□□□□ -1.01
VPS52-216ENST00000471309 GALNT4Q8N4A0 578 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 CDRT4Q8N9R6 151 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 RCBTB1Q8NDN9 531 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 OR10Q1Q8NGQ4 319 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 OR2T29Q8NH02 315 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 ADAMTS15Q8TE58 950 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 XAGE5Q8WWM1 108 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 HOXB13Q92826 284 aaPredicted RBP8.77□□□□□ -1.01
VPS52-216ENST00000471309 SDCCAG3Q96C92 435 aa8.77□□□□□ -1.01
VPS52-216ENST00000471309 ZNF578Q96N58 590 aaPredicted RBP8.77□□□□□ -1.01
VPS52-216ENST00000471309 DGAT2Q96PD7 388 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms