RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 MARCKSP29966 332 aaPredicted RBP3□□□□□ -1.93
BRCA2-202ENST00000470094 STIP1P31948 543 aaKnown RBP3□□□□□ -1.93
BRCA2-202ENST00000470094 ID1P41134 155 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 CCL11P51671 97 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 GEMP55040 296 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 PRKCEQ02156 737 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 RUNX3Q13761 415 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 DPYSQ14117 519 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 SPHARQ15513 63 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 ATAD3CQ5T2N8 411 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 REP15Q6BDI9 236 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 RAET1GQ6H3X3 334 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 CCDC197Q8NCU1 140 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 BEST4Q8NFU0 473 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 TCP11Q8WWU5 503 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 C16orf58Q96GQ5 468 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 GPR137Q96N19 417 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 S1PR3Q99500 378 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 CCSER1Q9C0I3 900 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 RAB17Q9H0T7 212 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 ATG10Q9H0Y0 220 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 GANQ9H2C0 597 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 CUTCQ9NTM9 273 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 PLEK2Q9NYT0 353 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 ANKMY1Q9P2S6 941 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 COPS7AQ9UBW8 275 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 VSIG4Q9Y279 399 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 FBXO7Q9Y3I1 522 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 U3KQV3 271 aa3□□□□□ -1.93
BRCA2-202ENST00000470094 TMEM89A2RUT3 159 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 FOXI3A8MTJ6 420 aaPredicted RBP2.99□□□□□ -1.93
BRCA2-202ENST00000470094 EEF2KO00418 725 aaKnown RBP2.99□□□□□ -1.93
BRCA2-202ENST00000470094 ADAM12O43184 909 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 NME2P1O60361 137 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 CPNE6O95741 557 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 EPOP01588 193 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 THY1P04216 161 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 FHP07954 510 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 OR9G9P0C7N8 305 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 NCF1P14598 390 aaPredicted RBP2.99□□□□□ -1.93
BRCA2-202ENST00000470094 EZRP15311 586 aaKnown RBP2.99□□□□□ -1.93
BRCA2-202ENST00000470094 FUT1P19526 365 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 FCARP24071 287 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 CCR4P51679 360 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 SLC26A5P58743 744 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 HERV-K104P63124 156 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 GSTO1P78417 241 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 GABPAQ06546 454 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 MFGE8Q08431 387 aaPredicted RBP2.99□□□□□ -1.93
BRCA2-202ENST00000470094 HSPA14Q0VDF9 509 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 SCGB2A2Q13296 93 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 PDIA5Q14554 519 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 MEF2DQ14814 521 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 HEPACAMQ14CZ8 416 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 TRADDQ15628 312 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 CCL14Q16627 93 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 Q1RN00 199 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 WSCD2Q2TBF2 565 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 LIPJQ5W064 366 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 SNRNP48Q6IEG0 339 aaKnown RBP2.99□□□□□ -1.93
BRCA2-202ENST00000470094 CD177Q8N6Q3 437 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 RNF148Q8N7C7 305 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 ZNF540Q8NDQ6 660 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 OR6M1Q8NGM8 313 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 RAB39BQ96DA2 213 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 MRPL53Q96EL3 112 aaKnown RBP2.99□□□□□ -1.93
BRCA2-202ENST00000470094 SERAC1Q96JX3 654 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 COQ7Q99807 217 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 AGPAT1Q99943 283 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 DPH5Q9H2P9 285 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 ECT2Q9H8V3 914 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 HOMER3Q9NSC5 361 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 SLC35D1Q9NTN3 355 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 DDX28Q9NUL7 540 aaKnown RBP2.99□□□□□ -1.93
BRCA2-202ENST00000470094 ABCD2Q9UBJ2 740 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 CLIP2Q9UDT6 1046 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 IL20RAQ9UHF4 553 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 NAALAD2Q9Y3Q0 740 aa2.99□□□□□ -1.93
BRCA2-202ENST00000470094 KIAA0513O60268 411 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 CSDE1O75534 798 aaKnown RBP2.98□□□□□ -1.93
BRCA2-202ENST00000470094 KBTBD11O94819 623 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 VENTXO95231 258 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 SYNGR4O95473 234 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 DIRAS3O95661 229 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 KRTAP1-4P0C5Y4 121 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 TPBGLP0DKB5 382 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 PRDX6P30041 224 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 HSPA1LP34931 641 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 MDH1P40925 334 aaKnown RBP2.98□□□□□ -1.93
BRCA2-202ENST00000470094 ALDH3B1P43353 468 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 SPP2Q13103 211 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 EXOSC7Q15024 291 aaKnown RBP2.98□□□□□ -1.93
BRCA2-202ENST00000470094 CARTPTQ16568 116 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 PCK2Q16822 640 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 RNF212Q495C1 297 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 GPAT3Q53EU6 434 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 RIPPLY2Q5TAB7 128 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 OLFML2AQ68BL7 652 aa2.98□□□□□ -1.93
BRCA2-202ENST00000470094 CAPN13Q6MZZ7 669 aaPredicted RBP2.98□□□□□ -1.93
BRCA2-202ENST00000470094 FAM159AQ6UWV7 190 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms