RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 KIAA1161Q6NSJ0 714 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 SWSAP1Q6NVH7 229 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 USP17L6PQ6QN14 398 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF730Q6ZMV8 503 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 OAFQ86UD1 273 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 TAC4Q86UU9 113 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 KLHDC8BQ8IXV7 354 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 SLC44A3Q8N4M1 653 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 OR2C3Q8N628 320 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 C15orf54Q8N8G6 183 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 GMCL1P1Q8NEA9 526 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 FAM71CQ8NEG0 241 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF548Q8NEK5 533 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 FAM46DQ8NEK8 389 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 AGBL3Q8NEM8 1001 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 PXT1Q8NFP0 134 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 OR5M9Q8NGP3 310 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 MOSPD2Q8NHP6 518 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 RPLP0P6Q8NHW5 317 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 PCDH19Q8TAB3 1148 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF461Q8TAF7 563 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 NANPQ8TBE9 248 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ST7LQ8TDW4 575 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 LPPQ93052 612 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 RAB24Q969Q5 203 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 NTAN1Q96AB6 310 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 UPRTQ96BW1 309 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ATG4CQ96DT6 458 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ELP4Q96EB1 424 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 RNF31Q96EP0 1072 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 DYNLL2Q96FJ2 89 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ZC3H10Q96K80 434 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 CMTM3Q96MX0 182 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 SFXN2Q96NB2 322 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF583Q96ND8 569 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF599Q96NL3 588 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 FAM193BQ96PV7 902 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 PFDN5Q99471 154 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 C2orf88Q9BSF0 95 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 LGR4Q9BXB1 951 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 TEX101Q9BY14 249 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 NLNQ9BYT8 704 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 MAGEB5Q9BZ81 275 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 SLC29A3Q9BZD2 475 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 GPR61Q9BZJ8 451 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 METTL9Q9H1A3 318 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 WNT5BQ9H1J7 359 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 TFB2MQ9H5Q4 396 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ESRP2Q9H6T0 727 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 IL1RL2Q9HB29 575 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 GPN1Q9HCN4 374 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ABCB9Q9NP78 766 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 MYOZ1Q9NP98 299 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 PRMT8Q9NR22 394 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 DLL4Q9NR61 685 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 CISHQ9NSE2 258 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 GPATCH2Q9NW75 528 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 THUMPD1Q9NXG2 353 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ASIC5Q9NY37 505 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 COQ3Q9NZJ6 369 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 NLKQ9UBE8 527 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF70Q9UC06 446 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 MIOXQ9UGB7 285 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF214Q9UL59 606 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 UBQLN1Q9UMX0 589 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 CORO2BQ9UQ03 480 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF451Q9Y4E5 1061 aa4.61□□□□□ -1.67
SF3B1-207ENST00000468925 POLR3HQ9Y535 204 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 DICER1Q9UPY3 1922 aaKnown RBP4.61□□□□□ -1.67
SF3B1-207ENST00000468925 TAF1P21675 1872 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 A0A0D9SG52 128 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ANKRD61A6NGH8 418 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 C5orf52A6NGY3 159 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ACOD1A6NK06 481 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 EFCAB7A8K855 629 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 SNRPGP15A8MWD9 76 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 DISC1C4P0D8 188 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 NEDD8-MDP1E9PL57 170 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 GPR171O14626 319 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 SLC16A4O15374 487 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 PLOD3O60568 738 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 PPP1R11O60927 126 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ULK1O75385 1050 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 RBBP9O75884 186 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 MPC2O95563 127 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 APBB3O95704 486 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 HPP00738 406 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 CSF2P04141 144 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ACAA1P09110 424 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 SPARCP09486 303 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ARP10275 920 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 NCK1P16333 377 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ARF4P18085 180 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 OGNP20774 298 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 PPIBP23284 216 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 PTAFRP25105 342 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ACADLP28330 430 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 LAP3P28838 519 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 PDHA2P29803 388 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 GALNSP34059 522 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms