RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 PYROXD1Q8WU10 500 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 ANP32BQ92688 251 aaKnown RBP11.91□□□□□ -0.5
PTPN7-207ENST00000468385 CDKL2Q92772 493 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 COX4I2Q96KJ9 171 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 WDR41Q9HAD4 459 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 DTX4Q9Y2E6 619 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 SNX24Q9Y343 169 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 PCDHGA11Q9Y5H2 935 aa11.91□□□□□ -0.5
PTPN7-207ENST00000468385 TCRBV9S1A1TA0A576 114 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 FAM159BA6NKW6 160 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 EFCAB8A8MWE9 144 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 KIAA1324LA8MWY0 1029 aaPredicted RBP11.9□□□□□ -0.5
PTPN7-207ENST00000468385 SNPHO15079 494 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 GBAP04062 536 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 CPN1P15169 458 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 S1PR1P21453 382 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 GPX3P22352 226 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 TMEM81Q6P7N7 255 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 ANGPTL8Q6UXH0 198 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 CYS1Q717R9 158 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 NUDT13Q86X67 352 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 MYLK4Q86YV6 388 aaPredicted RBP11.9□□□□□ -0.5
PTPN7-207ENST00000468385 CREG2Q8IUH2 290 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 LRRC75A-AS1Q8N1F1 130 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 WDR20Q8TBZ3 569 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 NUDT8Q8WV74 236 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 ZNF592Q92610 1267 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 HGDQ93099 445 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 ZFP3Q96NJ6 502 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 UCN2Q96RP3 112 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 NODALQ96S42 347 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 MDFIQ99750 246 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 G6PC3Q9BUM1 346 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 NXF5Q9H1B4 397 aaKnown RBP11.9□□□□□ -0.5
PTPN7-207ENST00000468385 ACTR8Q9H981 624 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 NMRAL1Q9HBL8 299 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 PSD3Q9NYI0 1048 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 EXPH5Q8NEV8 1989 aa11.9□□□□□ -0.5
PTPN7-207ENST00000468385 C2orf72A6NCS6 295 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 LRRC14BA6NHZ5 514 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 A8MXE2 369 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 SIAH2O43255 324 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 ARHGEF9O43307 516 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 CDH16O75309 829 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 PPM1BO75688 479 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 RHOXF2BP0C7M4 288 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 NAGAP17050 411 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 PIK3R1P27986 724 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 SPRP35270 261 aaPredicted RBP11.89□□□□□ -0.51
PTPN7-207ENST00000468385 CPA2P48052 419 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 NEK2P51955 445 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 PHEXP78562 749 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 CPSF6Q16630 551 aaKnown RBP eCLIP11.89□□□□□ -0.51
PTPN7-207ENST00000468385 GRTP1Q5TC63 336 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 RAPH1Q70E73 1250 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 P3H2Q8IVL5 708 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 OR7G1Q8NGA0 311 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 WNT2BQ93097 391 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 INTS12Q96CB8 462 aaKnown RBP11.89□□□□□ -0.51
PTPN7-207ENST00000468385 NXNL1Q96CM4 212 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 REPS1Q96D71 796 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 PIP5K1AQ99755 562 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 TM9SF2Q99805 663 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 OSBPL11Q9BXB4 747 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 OR2B2Q9GZK3 357 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 METTL7AQ9H8H3 244 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 GALNT9Q9HCQ5 603 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 SAYSD1Q9NPB0 183 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 CLCF1Q9UBD9 225 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 TESMINQ9Y4I5 508 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 ANGPTL3Q9Y5C1 460 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 MED12Q93074 2177 aa11.89□□□□□ -0.51
PTPN7-207ENST00000468385 H0Y3Z8 333 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 H7C1Q1 480 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 FOXE1O00358 373 aaPredicted RBP11.88□□□□□ -0.51
PTPN7-207ENST00000468385 CASKO14936 926 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 UGDHO60701 494 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 ICOSLGO75144 302 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 LTA4HP09960 611 aaKnown RBP11.88□□□□□ -0.51
PTPN7-207ENST00000468385 KRT15P19012 456 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 NT5EP21589 574 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 GCKP35557 465 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 XKP51811 444 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 GFRA1P56159 465 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 GPX6P59796 221 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 SRYQ05066 204 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 MGAT2Q10469 447 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 SLMAPQ14BN4 828 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 NNATQ16517 81 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 SLC30A6Q6NXT4 461 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 C3orf62Q6ZUJ4 267 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 NUP54Q7Z3B4 507 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 TBC1D1Q86TI0 1168 aaPredicted RBP11.88□□□□□ -0.51
PTPN7-207ENST00000468385 TRIM42Q8IWZ5 723 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 CTAGE3PQ8IX95 158 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 GCNT2Q8N0V5 402 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 WDSUB1Q8N9V3 476 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 L3MBTL4Q8NA19 623 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 OR4K14Q8NGD5 310 aa11.88□□□□□ -0.51
PTPN7-207ENST00000468385 CTHRC1Q96CG8 243 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms