RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 EXPH5Q8NEV8 1989 aa16.93■□□□□ 0.3
LINC00888-201ENST00000468380 PLOD2O00469 737 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 PAX1P15863 534 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 CD79BP40259 229 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 PCYT1AP49585 367 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 LHX2P50458 406 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 GFRA1P56159 465 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 TNK1Q13470 666 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 HLA-DQA1Q5Y7H0 255 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 VWA1Q6PCB0 445 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 BTLAQ7Z6A9 289 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 MAPK1IP1LQ8NDC0 245 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 HGDQ93099 445 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 MED18Q9BUE0 208 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 CD244Q9BZW8 370 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 OR2B2Q9GZK3 357 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 NXF5Q9H1B4 397 aaKnown RBP16.92■□□□□ 0.3
LINC00888-201ENST00000468380 OR10A5Q9H207 317 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 ACBD3Q9H3P7 528 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 METTL7AQ9H8H3 244 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 CAB39LQ9H9S4 337 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 PRM3Q9NNZ6 103 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 EXO1Q9UQ84 846 aaKnown RBP16.92■□□□□ 0.3
LINC00888-201ENST00000468380 ABCA1O95477 2261 aa16.92■□□□□ 0.3
LINC00888-201ENST00000468380 PGRMC2O15173 223 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 PIAS1O75925 651 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 SMNDC1O75940 238 aaKnown RBP eCLIP16.91■□□□□ 0.31e-7■□□□□ 11.3
LINC00888-201ENST00000468380 SOX30O94993 753 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 CD1DP15813 335 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 S1PR1P21453 382 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 UGT2B10P36537 528 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 BUD31P41223 144 aaPredicted RBP16.91■□□□□ 0.3
LINC00888-201ENST00000468380 TMED10P49755 219 aaKnown RBP16.91■□□□□ 0.3
LINC00888-201ENST00000468380 CLDN18P56856 261 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 NRG3P56975 720 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 RPS13P62277 151 aaKnown RBP16.91■□□□□ 0.3
LINC00888-201ENST00000468380 EEF1A1P68104 462 aaKnown RBP16.91■□□□□ 0.3
LINC00888-201ENST00000468380 RPP38P78345 283 aaKnown RBP16.91■□□□□ 0.3
LINC00888-201ENST00000468380 DDX39BQ13838 428 aaKnown RBP16.91■□□□□ 0.3
LINC00888-201ENST00000468380 FRG1Q14331 258 aaKnown RBP16.91■□□□□ 0.3
LINC00888-201ENST00000468380 PPP1R7Q15435 360 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 EEF1A1P5Q5VTE0 462 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 ENPP6Q6UWR7 440 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 PLEKHM3Q6ZWE6 761 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 PDPRQ8NCN5 879 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 OR14L1PQ8NHC6 308 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 HUS1BQ8NHY5 278 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 UBE2E3Q969T4 207 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 ZC3HAV1LQ96H79 300 aaKnown RBP16.91■□□□□ 0.3
LINC00888-201ENST00000468380 FAM111AQ96PZ2 611 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 OPN3Q9H1Y3 402 aaPredicted RBP16.91■□□□□ 0.3
LINC00888-201ENST00000468380 POPDC3Q9HBV1 291 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 MOCS1Q9NZB8 636 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 CD274Q9NZQ7 290 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 MAPRE3Q9UPY8 281 aa16.91■□□□□ 0.3
LINC00888-201ENST00000468380 MTO1Q9Y2Z2 717 aaKnown RBP16.91■□□□□ 0.3
LINC00888-201ENST00000468380 A0A0A6YYD5 115 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 PPM1BO75688 479 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 CBR3O75828 277 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 AIFM1O95831 613 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 CCDC166P0CW27 439 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 CHMP24386 653 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 BSGP35613 385 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 GMPRP36959 345 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 RAP1GDS1P52306 607 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 MGAT5Q09328 741 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 SLC30A6Q6NXT4 461 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 TMEM81Q6P7N7 255 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 GRAMD2AQ8IUY3 354 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 GRK7Q8WTQ7 553 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 PGM2Q96G03 612 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 MTERF1Q99551 399 aaKnown RBP16.9■□□□□ 0.3
LINC00888-201ENST00000468380 RHOJQ9H4E5 214 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 ZNF701Q9NV72 531 aaPredicted RBP16.9■□□□□ 0.3
LINC00888-201ENST00000468380 HEY2Q9UBP5 337 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 ASIC3Q9UHC3 531 aa16.9■□□□□ 0.3
LINC00888-201ENST00000468380 PHGDHO43175 533 aaKnown RBP16.89■□□□□ 0.29
LINC00888-201ENST00000468380 HCRTR2O43614 444 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 CDH16O75309 829 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 FAM58BPP0C7Q3 252 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 NR2F6P10588 404 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 GPX3P22352 226 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 GCKP35557 465 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 KIR2DL2P43627 348 aaPredicted RBP16.89■□□□□ 0.29
LINC00888-201ENST00000468380 FNTAP49354 379 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 NNATQ16517 81 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 KBTBD12Q3ZCT8 623 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 ANKRD34AQ69YU3 496 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 HEPHL1Q6MZM0 1159 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 NUP54Q7Z3B4 507 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 ANKMY2Q8IV38 441 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 GALNT12Q8IXK2 581 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 PDIK1LQ8N165 341 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 MEIOBQ8N635 442 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 CNEP1R1Q8N9A8 125 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 C17orf47Q8NEP4 570 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 PBKQ96KB5 322 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 OSBPL11Q9BXB4 747 aa16.89■□□□□ 0.29
LINC00888-201ENST00000468380 DDX31Q9H8H2 851 aaKnown RBP16.89■□□□□ 0.29
LINC00888-201ENST00000468380 SMYD2Q9NRG4 433 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms