RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 LETMD1Q6P1Q0 360 aa16.07■□□□□ 0.16
COL7A1-206ENST00000466591 ADGRD1Q6QNK2 874 aa16.07■□□□□ 0.16
COL7A1-206ENST00000466591 GPRIN3Q6ZVF9 776 aa16.07■□□□□ 0.16
COL7A1-206ENST00000466591 ULK2Q8IYT8 1036 aa16.07■□□□□ 0.16
COL7A1-206ENST00000466591 OR1J4Q8NGS1 313 aa16.07■□□□□ 0.16
COL7A1-206ENST00000466591 METTL6Q8TCB7 284 aa16.07■□□□□ 0.16
COL7A1-206ENST00000466591 DTNBP1Q96EV8 351 aa16.07■□□□□ 0.16
COL7A1-206ENST00000466591 HSPBAP1Q96EW2 488 aa16.07■□□□□ 0.16
COL7A1-206ENST00000466591 UTS2RQ9UKP6 389 aa16.07■□□□□ 0.16
COL7A1-206ENST00000466591 PCDHGB3Q9Y5G1 929 aa16.07■□□□□ 0.16
COL7A1-206ENST00000466591 ZNF407Q9C0G0 2248 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 EML6Q6ZMW3 1958 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 ULK1O75385 1050 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 IL2RAP01589 272 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 CLPSP04118 112 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 ENDOUP21128 410 aaKnown RBP16.06■□□□□ 0.16
COL7A1-206ENST00000466591 BMP5P22003 454 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 GPX3P22352 226 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 RCAN2Q14206 197 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 EXOSC7Q15024 291 aaKnown RBP16.06■□□□□ 0.16
COL7A1-206ENST00000466591 ERCC6LQ2NKX8 1250 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 RTL6Q6ICC9 239 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 ANGPTL8Q6UXH0 198 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 SLC22A9Q8IVM8 553 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 CEP112Q8N8E3 955 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 ZNF615Q8N8J6 731 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 C17orf47Q8NEP4 570 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 CDC26Q8NHZ8 85 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 LCORQ96JN0 433 aaPredicted RBP16.06■□□□□ 0.16
COL7A1-206ENST00000466591 GNRHR2Q96P88 292 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 ITPAQ9BY32 194 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 ANGPTL4Q9BY76 406 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 C15orf41Q9Y2V0 281 aa16.06■□□□□ 0.16
COL7A1-206ENST00000466591 AHRRA9YTQ3 701 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 MANBAO00462 879 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 PCDH7O60245 1069 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 TRIM3O75382 744 aaPredicted RBP16.05■□□□□ 0.16
COL7A1-206ENST00000466591 PPM1BO75688 479 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 ATP1B1P05026 303 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 HSD3B1P14060 373 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 HSD3B2P26439 372 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 ADH7P40394 386 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 PEX19P40855 299 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 KIR2DL3P43628 341 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 CDK9P50750 372 aaKnown RBP16.05■□□□□ 0.16
COL7A1-206ENST00000466591 TRA2BP62995 288 aaKnown RBP16.05■□□□□ 0.16
COL7A1-206ENST00000466591 TFF3Q07654 80 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 ACSM2AQ08AH3 577 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 CSTF3Q12996 717 aaKnown RBP16.05■□□□□ 0.16
COL7A1-206ENST00000466591 SPDYAQ5MJ70 313 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 ACSM2BQ68CK6 577 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 FAM111BQ6SJ93 734 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 ARSKQ6UWY0 536 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 TRMT10CQ7L0Y3 403 aaKnown RBP16.05■□□□□ 0.16
COL7A1-206ENST00000466591 LACC1Q8IV20 430 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 SAMD14Q8IZD0 417 aaPredicted RBP16.05■□□□□ 0.16
COL7A1-206ENST00000466591 ZNF441Q8N8Z8 693 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 OR52R1Q8NGF1 315 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 KIF18AQ8NI77 898 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 ADIPOR1Q96A54 375 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 OMA1Q96E52 524 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 TRIB1Q96RU8 372 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 OSBPL11Q9BXB4 747 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 NXF5Q9H1B4 397 aaKnown RBP16.05■□□□□ 0.16
COL7A1-206ENST00000466591 EHD3Q9NZN3 535 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 PLLPQ9Y342 182 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 SLC6A5Q9Y345 797 aa16.05■□□□□ 0.16
COL7A1-206ENST00000466591 PHF3Q92576 2039 aaKnown RBP16.04■□□□□ 0.16
COL7A1-206ENST00000466591 APCP25054 2843 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 GOLGA8RI6L899 631 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 PPP6CO00743 305 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 ACOX3O15254 700 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 ABHD2P08910 425 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 NAGAP17050 411 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 IGFBP2P18065 325 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 ATP5F1P24539 256 aaPredicted RBP16.04■□□□□ 0.16
COL7A1-206ENST00000466591 IL12BP29460 328 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 HSD17B3P37058 310 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 CASP3P42574 277 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 DCAF7P61962 342 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 BTKQ06187 659 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 GALNT1Q10472 559 aaPredicted RBP16.04■□□□□ 0.16
COL7A1-206ENST00000466591 MAP4K2Q12851 820 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 IMPG1Q17R60 797 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 PRICKLE4Q2TBC4 344 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 SPIN4Q56A73 249 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 SLC30A6Q6NXT4 461 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 FAM180BQ6P0A1 224 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 NUP54Q7Z3B4 507 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 LCA5Q86VQ0 697 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 ZZZ3Q8IYH5 903 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 MMP21Q8N119 569 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 OR14L1PQ8NHC6 308 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 EXOSC8Q96B26 276 aaKnown RBP16.04■□□□□ 0.16
COL7A1-206ENST00000466591 TM4SF18Q96CE8 201 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 TMCO6Q96DC7 493 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 TMEM41AQ96HV5 264 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 TIMP4Q99727 224 aa16.04■□□□□ 0.16
COL7A1-206ENST00000466591 TREX2Q9BQ50 279 aaPredicted RBP16.04■□□□□ 0.16
COL7A1-206ENST00000466591 PROK2Q9HC23 129 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms