RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 GLS2Q9UI32 602 aa6.92□□□□□ -1.3
RPUSD3-212ENST00000466141 TMPRSS11EQ9UL52 423 aa6.92□□□□□ -1.3
RPUSD3-212ENST00000466141 NEU2Q9Y3R4 380 aa6.92□□□□□ -1.3
RPUSD3-212ENST00000466141 ST14Q9Y5Y6 855 aa6.92□□□□□ -1.3
RPUSD3-212ENST00000466141 PUS1Q9Y606 427 aaKnown RBP eCLIP6.92□□□□□ -1.3
RPUSD3-212ENST00000466141 FKBP7Q9Y680 259 aa6.92□□□□□ -1.3
RPUSD3-212ENST00000466141 ARL5AQ9Y689 179 aa6.92□□□□□ -1.3
RPUSD3-212ENST00000466141 SLC22A7Q9Y694 548 aa6.92□□□□□ -1.3
RPUSD3-212ENST00000466141 SNRNP200O75643 2136 aaKnown RBP6.92□□□□□ -1.3
RPUSD3-212ENST00000466141 IGHV5-10-1A0A0J9YXX1 117 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 LOC101059948A0A1B0GTJ6 334 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 MFSD2BA6NFX1 497 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 ZNF729A6NN14 1252 aaPredicted RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 MARCH11A6NNE9 402 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 CCDC188H7C350 402 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 EREGO14944 169 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 BUD23O43709 281 aaKnown RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 H2AFYO75367 372 aaKnown RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 ATE1O95260 518 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 CLDN1O95832 211 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 SERPINA5P05154 406 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 FCER2P06734 321 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 CCNYL3P0C7X3 344 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 CBR1P16152 277 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 GLB1P16278 677 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 TNNI3P19429 210 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 PRPS1L1P21108 318 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 CA5AP35218 305 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 RPL22P35268 128 aaKnown RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 MAGEA6P43360 314 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 ACTR3P61158 418 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 B4GALNT1Q00973 533 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 SLC3A1Q07837 685 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 MAP4K2Q12851 820 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 TOP3AQ13472 1001 aaPredicted RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 PTPRCAPQ14761 206 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 TAF1AQ15573 450 aaPredicted RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 KCTD19Q17RG1 926 aaPredicted RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 MPEG1Q2M385 716 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 TRIM16LQ309B1 348 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 ATP13A5Q4VNC0 1218 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 C14orf28Q4W4Y0 310 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 PYCR3Q53H96 274 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 EXOSC6Q5RKV6 272 aaKnown RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 PDSS1Q5T2R2 415 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 DDI2Q5TDH0 399 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 AGAP7PQ5VUJ5 663 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 ZDHHC20Q5W0Z9 365 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 DOK6Q6PKX4 331 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 FAM151BQ6UXP7 276 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 ZNF534Q76KX8 674 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 DPPA2Q7Z7J5 298 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 PIM3Q86V86 326 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 NRROSQ86YC3 692 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 PHYKPLQ8IUZ5 450 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 CHERPQ8IWX8 916 aaKnown RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 LNX2Q8N448 690 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 FNDC5Q8NAU1 212 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 OR2L3Q8NG85 312 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 OR4K2Q8NGD2 314 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 OR13C4Q8NGS5 318 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 OR8K5Q8NH50 307 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 APOBEC4Q8WW27 367 aaKnown RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 GLYATL1Q969I3 302 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 MVB12AQ96EY5 273 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 APOPT1Q96IL0 206 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 SLC45A3Q96JT2 553 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 OR2M4Q96R27 311 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 ZNF251Q9BRH9 671 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 KIFC1Q9BW19 673 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 CDADC1Q9BWV3 514 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 GSDMCQ9BYG8 508 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 METTL9Q9H1A3 318 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 PPA2Q9H2U2 334 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 ZNF768Q9H5H4 540 aaKnown RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 ASB8Q9H765 288 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 GPN2Q9H9Y4 310 aaPredicted RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 CARS2Q9HA77 564 aaKnown RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 SEPSECSQ9HD40 501 aaKnown RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 BPIFA1Q9NP55 256 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 OBP2BQ9NPH6 170 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 EIF2B3Q9NR50 452 aaKnown RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 RAB6BQ9NRW1 208 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 OCIAD1Q9NX40 245 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 TMEM9Q9P0T7 183 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 GPN3Q9UHW5 284 aaPredicted RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 SLC9A8Q9Y2E8 581 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 KLHL20Q9Y2M5 609 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 KCTD3Q9Y597 815 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 MRPS18BQ9Y676 258 aaKnown RBP6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 KCNE2Q9Y6J6 123 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 FBN3Q75N90 2809 aa6.91□□□□□ -1.3
RPUSD3-212ENST00000466141 GLYATL1P3A0A0U1RQE8 302 aa6.9□□□□□ -1.3
RPUSD3-212ENST00000466141 GNG14A0A1W2PPG7 69 aa6.9□□□□□ -1.3
RPUSD3-212ENST00000466141 MROH6A6NGR9 719 aa6.9□□□□□ -1.3
RPUSD3-212ENST00000466141 CCDC154A6NI56 674 aa6.9□□□□□ -1.3
RPUSD3-212ENST00000466141 EFCAB7A8K855 629 aa6.9□□□□□ -1.3
RPUSD3-212ENST00000466141 AGAP14A8MT82 685 aa6.9□□□□□ -1.3
RPUSD3-212ENST00000466141 NPIPA2E9PIF3 369 aa6.9□□□□□ -1.3
RPUSD3-212ENST00000466141 GTPBP1O00178 669 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms