RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 TMEM64Q6YI46 380 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 RNF111Q6ZNA4 994 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 TBC1D1Q86TI0 1168 aaPredicted RBP8.89□□□□□ -0.99
USP39-212ENST00000465514 MYLK4Q86YV6 388 aaPredicted RBP8.89□□□□□ -0.99
USP39-212ENST00000465514 DND1Q8IYX4 353 aaKnown RBP8.89□□□□□ -0.99
USP39-212ENST00000465514 ST13P4Q8IZP2 240 aaPredicted RBP8.89□□□□□ -0.99
USP39-212ENST00000465514 ZCCHC7Q8N3Z6 543 aaKnown RBP8.89□□□□□ -0.99
USP39-212ENST00000465514 LIX1Q8N485 282 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 PPM1NQ8N819 430 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 NEIL3Q8TAT5 605 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 RIT1Q92963 219 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 NXNL1Q96CM4 212 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 CENPKQ9BS16 269 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 PLA2G12AQ9BZM1 189 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 QPCTLQ9NXS2 382 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 C6orf203Q9P0P8 240 aaPredicted RBP8.89□□□□□ -0.99
USP39-212ENST00000465514 RNF14Q9UBS8 474 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 CNOT11Q9UKZ1 510 aaKnown RBP8.89□□□□□ -0.99
USP39-212ENST00000465514 ASB4Q9Y574 426 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 PCDHGB3Q9Y5G1 929 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 A0A0A6YYD5 115 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 C15orf38-AP3S2A0A0A6YYH1 394 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 A0A1W2PR48 441 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 FAM187AA6NFU0 413 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 LRRC14BA6NHZ5 514 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 OR6C76A6NM76 312 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 AHRRA9YTQ3 701 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 CD5LO43866 347 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 TMPRSS11DO60235 418 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 TRIM3O75382 744 aaPredicted RBP8.88□□□□□ -0.99
USP39-212ENST00000465514 EEDO75530 441 aaKnown RBP8.88□□□□□ -0.99
USP39-212ENST00000465514 SOX30O94993 753 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 CLPSP04118 112 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 FAM58BPP0C7Q3 252 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 MTHFD2P13995 350 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 GDF1P27539 372 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 BSGP35613 385 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 BUD31P41223 144 aaPredicted RBP8.88□□□□□ -0.99
USP39-212ENST00000465514 ARFIP1P53367 373 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 DUSP8Q13202 625 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 EBPQ15125 230 aaKnown RBP8.88□□□□□ -0.99
USP39-212ENST00000465514 NTRK2Q16620 822 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 LIPJQ5W064 366 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 MRM1Q6IN84 353 aaKnown RBP8.88□□□□□ -0.99
USP39-212ENST00000465514 CYP20A1Q6UW02 462 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 C20orf204Q6ZNR8 217 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 MED12LQ86YW9 2145 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 TAGAPQ8N103 731 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 MEIOBQ8N635 442 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 KCTD4Q8WVF5 259 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 DIO2Q92813 273 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 UCN3Q969E3 161 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 ISL2Q96A47 359 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 PELOQ9BRX2 385 aaKnown RBP8.88□□□□□ -0.99
USP39-212ENST00000465514 DOHHQ9BU89 302 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 ZNF717Q9BY31 904 aaPredicted RBP8.88□□□□□ -0.99
USP39-212ENST00000465514 EPB41L4BQ9H329 900 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 DDX31Q9H8H2 851 aaKnown RBP8.88□□□□□ -0.99
USP39-212ENST00000465514 ACTR8Q9H981 624 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 LYARQ9NX58 379 aaKnown RBP8.88□□□□□ -0.99
USP39-212ENST00000465514 GALNT8Q9NY28 637 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 GRHL1Q9NZI5 618 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 JKAMPQ9P055 326 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 ACOT9Q9Y305 439 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 TSC22D4Q9Y3Q8 395 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 ANGPTL3Q9Y5C1 460 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 PCDHGA11Q9Y5H2 935 aa8.88□□□□□ -0.99
USP39-212ENST00000465514 C2orf92A0A1B0GVN3 265 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 A0A1W2PS29 197 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 ANKRD33BA6NCL7 494 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 SYCE1LA8MT33 242 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 CAPN14A8MX76 684 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 H0YIV9 168 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 TP53I11O14683 189 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 CASKO14936 926 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 PGRMC2O15173 223 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 RAD51CO43502 376 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 TRAPPC6AO75865 159 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 ACSL3O95573 720 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 AIFM1O95831 613 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 EPPINO95925 133 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 IL2RAP01589 272 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 SLC35E2P0CK97 266 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 NR2F6P10588 404 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 GFAPP14136 432 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 SSTR4P31391 388 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 GALNSP34059 522 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 TIMP3P35625 211 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 MAGEA4P43358 317 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 NEK2P51955 445 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 PLTPP55058 493 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 FBXW4P57775 412 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 PHEXP78562 749 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 IRF9Q00978 393 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 CRYZQ08257 329 aaKnown RBP8.87□□□□□ -0.99
USP39-212ENST00000465514 CUL3Q13618 768 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 VEZF1Q14119 521 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 SETDB1Q15047 1291 aa8.87□□□□□ -0.99
USP39-212ENST00000465514 CPSF6Q16630 551 aaKnown RBP eCLIP8.87□□□□□ -0.99
USP39-212ENST00000465514 PFKFB4Q16877 469 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms