RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 LINC00612Q8N6U2 182 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 OR10G8Q8NGN5 311 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 OR5M8Q8NGP6 311 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 DNAJA4Q8WW22 397 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-208ENST00000464001 HAS2Q92819 552 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 GGHQ92820 318 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 MCHR2Q969V1 340 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 LRRC39Q96DD0 335 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 ATP6V1G3Q96LB4 118 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 GAL3ST1Q99999 423 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 RAB11FIP5Q9BXF6 653 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 PKIBQ9C010 78 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 AGPAT3Q9NRZ7 376 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 PSORS1C1Q9UIG5 152 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 CRLS1Q9UJA2 301 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 TNNQ9UQP3 1299 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 KIF27Q86VH2 1401 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 MAP3K19Q56UN5 1328 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 RNF123Q5XPI4 1314 aa3.44□□□□□ -1.86
ITGB1-208ENST00000464001 OR2AG2A6NM03 316 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 A8MUI8 341 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 SPECC1L-ADORA2AF8WAN1 911 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 GOLGA8SH3BPF8 625 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 FOXE1O00358 373 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 ZNF195O14628 629 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 ACSL4O60488 711 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 RNASEH1O60930 286 aaKnown RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 ATP6AP2O75787 350 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 POP4O95707 220 aaKnown RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 MOCS2O96007 188 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 AGTP01019 485 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 C9P02748 559 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 MT-ND1P03886 318 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 DNAH10OSP0CZ25 163 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 CAPN2P17655 700 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 CHI3L1P36222 383 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 LONP1P36776 959 aaKnown RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 NUP62P37198 522 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 PTGFRP43088 359 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 CDKN1BP46527 198 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 FNTAP49354 379 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 B3GALT5-AS1P59052 145 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 KRTAP12-2P59991 146 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 FKBP1BP68106 108 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 CBX1P83916 185 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 NFATC2Q13469 925 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 CUL3Q13618 768 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 SELPLGQ14242 412 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 FASTKD3Q14CZ7 662 aaKnown RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 WDR43Q15061 677 aaKnown RBP eCLIP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 PDK3Q15120 406 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 ACKR1Q16570 336 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 TPD52L1Q16890 204 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 PDLIM3Q53GG5 364 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 C10orf120Q5SQS8 335 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 CCDC122Q5T0U0 273 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 ZNF770Q6IQ21 691 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 FAM159AQ6UWV7 190 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 TRMT11Q7Z4G4 463 aaKnown RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 BIVMQ86UB2 503 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 COMMD2Q86X83 199 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 CROCCP3Q8IVE0 287 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 UBQLNLQ8IYU4 475 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 FAM9CQ8IZT9 166 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 KIRREL3Q8IZU9 778 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 LINC00469Q8N7U9 141 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 BPIFCQ8NFQ6 507 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 LIPHQ8WWY8 451 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 PROX1Q92786 737 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 KIAA1143Q96AT1 154 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 EFHD2Q96C19 240 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 SENP8Q96LD8 212 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 RAB40CQ96S21 281 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 SOSTQ9BQB4 213 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 BPIFA3Q9BQP9 254 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 LZTS2Q9BRK4 669 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 NUP58Q9BVL2 599 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 FTHL17Q9BXU8 183 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 SYNDIG1Q9H7V2 258 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 KCNK13Q9HB14 408 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 PHPT1Q9NRX4 125 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 FGF21Q9NSA1 209 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 THEGQ9P2T0 379 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 ONECUT1Q9UBC0 465 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 NOCTQ9UK39 431 aaKnown RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 MAN1B1Q9UKM7 699 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 KLK4Q9Y5K2 254 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 MYH14Q7Z406 1995 aaKnown RBP3.43□□□□□ -1.86
ITGB1-208ENST00000464001 KIF16BQ96L93 1317 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 CROCCQ5TZA2 2017 aa3.43□□□□□ -1.86
ITGB1-208ENST00000464001 CUX2O14529 1486 aa3.42□□□□□ -1.86
ITGB1-208ENST00000464001 IGHV3OR16-10A0A075B7F0 116 aa3.42□□□□□ -1.86
ITGB1-208ENST00000464001 HYKKA2RU49 373 aa3.42□□□□□ -1.86
ITGB1-208ENST00000464001 C15orf61A6NNL5 157 aa3.42□□□□□ -1.86
ITGB1-208ENST00000464001 A8MU10 97 aa3.42□□□□□ -1.86
ITGB1-208ENST00000464001 SDHDO14521 159 aa3.42□□□□□ -1.86
ITGB1-208ENST00000464001 ALOX15BO15296 676 aa3.42□□□□□ -1.86
ITGB1-208ENST00000464001 IDH3BO43837 385 aa3.42□□□□□ -1.86
ITGB1-208ENST00000464001 MAGEC1O60732 1142 aa3.42□□□□□ -1.86
ITGB1-208ENST00000464001 SAP30O75446 220 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms