RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 GALNT12Q8IXK2 581 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 CNEP1R1Q8N9A8 125 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 C17orf47Q8NEP4 570 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 RDH11Q8TC12 318 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 ADIPOR1Q96A54 375 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 LRRC39Q96DD0 335 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 OSBPL11Q9BXB4 747 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 CXorf21Q9HAI6 301 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 SERHLQ9NQF3 203 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 NSMCE4AQ9NXX6 385 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 ELOVL5Q9NYP7 299 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 KLRF1Q9NZS2 232 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 MAPRE3Q9UPY8 281 aa13.14□□□□□ -0.31
SMC1A-204ENST00000463684 EXO1Q9UQ84 846 aaKnown RBP13.14□□□□□ -0.31
SMC1A-204ENST00000463684 GOLGA6L10A0A0M3HER8 536 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 A0A1W2PR48 441 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 C2orf72A6NCS6 295 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 PGRMC1O00264 195 aaKnown RBP13.13□□□□□ -0.31
SMC1A-204ENST00000463684 PLOD2O00469 737 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 PLPP1O14494 284 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 PPM1BO75688 479 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 RHOXF2BP0C7M4 288 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 FAM58BPP0C7Q3 252 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 POU2F1P14859 743 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 EPB42P16452 691 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 NAGAP17050 411 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 PTX3P26022 381 aaPredicted RBP13.13□□□□□ -0.31
SMC1A-204ENST00000463684 PIK3R1P27986 724 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 UGT2B10P36537 528 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 PIK3CBP42338 1070 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 KCNJ5P48544 419 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 STARP49675 285 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 ARFIP1P53367 373 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 ATP6V0D1P61421 351 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 POU4F1Q01851 419 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 FUT7Q11130 342 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 SNTA1Q13424 505 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 E2F2Q14209 437 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 OR2A2Q6IF42 318 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 TMEM81Q6P7N7 255 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 MEIOBQ8N635 442 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 ZNF615Q8N8J6 731 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 PDPRQ8NCN5 879 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 OR7G1Q8NGA0 311 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 HUS1BQ8NHY5 278 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 TMEM171Q8WVE6 324 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 STARD4Q96DR4 205 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 DTNBP1Q96EV8 351 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 TSPAN17Q96FV3 270 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 PGM2Q96G03 612 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 G6PC3Q9BUM1 346 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 OR2B2Q9GZK3 357 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 RHOJQ9H4E5 214 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 CXorf56Q9H5V9 222 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 TAS2R10Q9NYW0 307 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 RNF112Q9ULX5 631 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 DLGAP4Q9Y2H0 992 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 ASB4Q9Y574 426 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 TEX264Q9Y6I9 313 aa13.13□□□□□ -0.31
SMC1A-204ENST00000463684 ZANQ9Y493 2812 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 C16orf97H3BN30 126 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 CDC25BP30305 580 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 GFRA1P56159 465 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 PHEXP78562 749 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 DMTNQ08495 405 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 OR4D1Q15615 310 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 HEPHL1Q6MZM0 1159 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 MYLK4Q86YV6 388 aaPredicted RBP13.12□□□□□ -0.31
SMC1A-204ENST00000463684 PHC2Q8IXK0 858 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 RNF175Q8N4F7 328 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 TMEM158Q8WZ71 300 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 EXT2Q93063 718 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 CTHRC1Q96CG8 243 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 ZC3HAV1LQ96H79 300 aaKnown RBP13.12□□□□□ -0.31
SMC1A-204ENST00000463684 HS3ST6Q96QI5 342 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 MTERF1Q99551 399 aaKnown RBP13.12□□□□□ -0.31
SMC1A-204ENST00000463684 GALNT9Q9HCQ5 603 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 OPTCQ9UBM4 332 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 ATRQ13535 2644 aa13.12□□□□□ -0.31
SMC1A-204ENST00000463684 TMCC2O75069 709 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 EEDO75530 441 aaKnown RBP13.11□□□□□ -0.31
SMC1A-204ENST00000463684 TGM6O95932 706 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 TP53P04637 393 aaPredicted RBP13.11□□□□□ -0.31
SMC1A-204ENST00000463684 C8BP07358 591 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 CT62P0C5K7 136 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 NID1P14543 1247 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 CD1DP15813 335 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 PAX1P15863 534 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 LHX2P50458 406 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 ATP5J2P56134 94 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 TNK1Q13470 666 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 OR52E8Q6IFG1 317 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 MRM1Q6IN84 353 aaKnown RBP13.11□□□□□ -0.31
SMC1A-204ENST00000463684 GRHL2Q6ISB3 625 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 VWA1Q6PCB0 445 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 ZNF474Q6S9Z5 364 aaPredicted RBP13.11□□□□□ -0.31
SMC1A-204ENST00000463684 ZNF550Q7Z398 422 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 ANKMY2Q8IV38 441 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 OR4K14Q8NGD5 310 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 HGDQ93099 445 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms