RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 RASAL1O95294 804 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 FBXO45P0C2W1 286 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 MST1P26927 711 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 UQCRFS1P47985 274 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 TDGF1P3P51864 188 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 LARP4Q71RC2 724 aaKnown RBP eCLIP16.33■□□□□ 0.2
VPS52-214ENST00000463486 LIX1Q8N485 282 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 OR52R1Q8NGF1 315 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 ASB15Q8WXK1 588 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 MTERF3Q96E29 417 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 PPP1R36Q96LQ0 422 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 C5orf34Q96MH7 638 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 FRMD6Q96NE9 622 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 BBS4Q96RK4 519 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 GAL3ST4Q96RP7 486 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 NUF2Q9BZD4 464 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 ATP6V1HQ9UI12 483 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 ENTPD4Q9Y227 616 aa16.33■□□□□ 0.2
VPS52-214ENST00000463486 A8MVJ9 347 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 PLOD2O00469 737 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 PSMG1O95456 288 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 G6PDP11413 515 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 PRPS2P11908 318 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 ASMTP46597 345 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 MAPKAPK3Q16644 382 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 ATG16L1Q676U5 607 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 OPN5Q6U736 354 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 TMEM64Q6YI46 380 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 MAVSQ7Z434 540 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.32■□□□□ 0.2
VPS52-214ENST00000463486 SIAH3Q8IW03 269 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 SULF2Q8IWU5 870 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 TRIM42Q8IWZ5 723 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 KIRREL3Q8IZU9 778 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 BCORP1Q8N888 145 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 FNDC5Q8NAU1 212 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 TMEM178AQ8NBL3 297 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 PSD4Q8NDX1 1056 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 DNAJB8Q8NHS0 232 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 NR4A3Q92570 626 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 CIDECQ96AQ7 238 aaPredicted RBP16.32■□□□□ 0.2
VPS52-214ENST00000463486 NTNG2Q96CW9 530 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 SGCZQ96LD1 299 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 COL12A1Q99715 3063 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 ITPAQ9BY32 194 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 NXF5Q9H1B4 397 aaKnown RBP16.32■□□□□ 0.2
VPS52-214ENST00000463486 PFDN4Q9NQP4 134 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 AGPAT4Q9NRZ5 378 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 GIMAP4Q9NUV9 329 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 HPF1Q9NWY4 346 aa16.32■□□□□ 0.2
VPS52-214ENST00000463486 A0A087WV62 115 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 A0A0G2JMM0 328 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 A0A1W2PPB8 328 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 A0A1W2PRS3 328 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 CLEC18AA5D8T8 446 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 PINLYPA6NC86 204 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 KIR3DP1A8MWS1 328 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 SDHDO14521 159 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 SCAMP2O15127 329 aaKnown RBP16.31■□□□□ 0.2
VPS52-214ENST00000463486 GNLYP22749 145 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 MAPK1P28482 360 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 NR0B1P51843 470 aaKnown RBP16.31■□□□□ 0.2
VPS52-214ENST00000463486 NCBP2P52298 156 aaKnown RBP eCLIP16.31■□□□□ 0.22e-6■■□□□ 13
VPS52-214ENST00000463486 DIO3P55073 304 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 C21orf58P58505 322 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 SRSF1Q07955 248 aaKnown RBP eCLIP16.31■□□□□ 0.2
VPS52-214ENST00000463486 MRPL49Q13405 166 aaKnown RBP16.31■□□□□ 0.2
VPS52-214ENST00000463486 FAM180AQ6UWF9 173 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 CLEC18BQ6UXF7 455 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 RTL4Q6ZR62 310 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 ZNF551Q7Z340 670 aaPredicted RBP16.31■□□□□ 0.2
VPS52-214ENST00000463486 WDR75Q8IWA0 830 aaKnown RBP16.31■□□□□ 0.2
VPS52-214ENST00000463486 LRRC34Q8IZ02 419 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 FAM9CQ8IZT9 166 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 OR2L13Q8N349 312 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 CPSF7Q8N684 471 aaKnown RBP16.31■□□□□ 0.2
VPS52-214ENST00000463486 KRTCAP2Q8N6L1 136 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 GOLM1Q8NBJ4 401 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 CLEC18CQ8NCF0 446 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 COQ8BQ96D53 544 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 SPACA9Q96E40 222 aaPredicted RBP16.31■□□□□ 0.2
VPS52-214ENST00000463486 ELP4Q96EB1 424 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 VSTM2LQ96N03 204 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 PROK2Q9HC23 129 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 RYDENQ9NUL5 291 aaKnown RBP16.31■□□□□ 0.2
VPS52-214ENST00000463486 OLAHQ9NV23 265 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 BCAP29Q9UHQ4 241 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 ERVK-11Q9UQG0 969 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 GPR55Q9Y2T6 319 aaPredicted RBP16.31■□□□□ 0.2
VPS52-214ENST00000463486 ESPL1Q14674 2120 aa16.31■□□□□ 0.2
VPS52-214ENST00000463486 UPK1AO00322 258 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 ANKRD28O15084 1053 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 HDAC3O15379 428 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 PEX1O43933 1283 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 IFI6P09912 130 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 CT45A8P0DMV1 189 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 CT45A9P0DMV2 189 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 CCL3P10147 92 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 LAMP1P11279 417 aa16.3■□□□□ 0.2
VPS52-214ENST00000463486 DRD5P21918 477 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms