RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 IRX1P78414 480 aaPredicted RBP2.54□□□□□ -2
CD46-210ENST00000462968 PLOD1Q02809 727 aaPredicted RBP2.54□□□□□ -2
CD46-210ENST00000462968 PPIDQ08752 370 aaKnown RBP2.54□□□□□ -2
CD46-210ENST00000462968 TBL3Q12788 808 aaKnown RBP2.54□□□□□ -2
CD46-210ENST00000462968 PTP4A2Q12974 167 aa2.54□□□□□ -2
CD46-210ENST00000462968 RABEP1Q15276 862 aa2.54□□□□□ -2
CD46-210ENST00000462968 FAM153CQ494X1 144 aa2.54□□□□□ -2
CD46-210ENST00000462968 ZNF672Q499Z4 452 aaPredicted RBP2.54□□□□□ -2
CD46-210ENST00000462968 COBLL1Q53SF7 1204 aa2.54□□□□□ -2
CD46-210ENST00000462968 XKR6Q5GH73 641 aa2.54□□□□□ -2
CD46-210ENST00000462968 NHSL2Q5HYW2 709 aa2.54□□□□□ -2
CD46-210ENST00000462968 AGAP6Q5VW22 663 aa2.54□□□□□ -2
CD46-210ENST00000462968 ZNF474Q6S9Z5 364 aaPredicted RBP2.54□□□□□ -2
CD46-210ENST00000462968 GBP6Q6ZN66 633 aa2.54□□□□□ -2
CD46-210ENST00000462968 RINLQ6ZS11 566 aa2.54□□□□□ -2
CD46-210ENST00000462968 DTX2Q86UW9 622 aa2.54□□□□□ -2
CD46-210ENST00000462968 ZNF677Q86XU0 584 aa2.54□□□□□ -2
CD46-210ENST00000462968 GCNT2Q8N0V5 402 aa2.54□□□□□ -2
CD46-210ENST00000462968 B3GNT7Q8NFL0 401 aa2.54□□□□□ -2
CD46-210ENST00000462968 OR2L3Q8NG85 312 aa2.54□□□□□ -2
CD46-210ENST00000462968 SLC30A5Q8TAD4 765 aa2.54□□□□□ -2
CD46-210ENST00000462968 ZCCHC10Q8TBK6 192 aa2.54□□□□□ -2
CD46-210ENST00000462968 RAB3IL1Q8TBN0 382 aa2.54□□□□□ -2
CD46-210ENST00000462968 MRAPQ8TCY5 172 aa2.54□□□□□ -2
CD46-210ENST00000462968 ASZ1Q8WWH4 475 aa2.54□□□□□ -2
CD46-210ENST00000462968 TSLPQ969D9 159 aa2.54□□□□□ -2
CD46-210ENST00000462968 ULK4Q96C45 1275 aa2.54□□□□□ -2
CD46-210ENST00000462968 STARD4Q96DR4 205 aa2.54□□□□□ -2
CD46-210ENST00000462968 PGM2Q96G03 612 aa2.54□□□□□ -2
CD46-210ENST00000462968 WDYHV1Q96HA8 205 aa2.54□□□□□ -2
CD46-210ENST00000462968 MCEEQ96PE7 176 aa2.54□□□□□ -2
CD46-210ENST00000462968 TSGA13Q96PP4 275 aa2.54□□□□□ -2
CD46-210ENST00000462968 OR2A5Q96R48 311 aa2.54□□□□□ -2
CD46-210ENST00000462968 RASL10BQ96S79 203 aa2.54□□□□□ -2
CD46-210ENST00000462968 CCT8L2Q96SF2 557 aa2.54□□□□□ -2
CD46-210ENST00000462968 COPS8Q99627 209 aa2.54□□□□□ -2
CD46-210ENST00000462968 CCDC77Q9BR77 488 aa2.54□□□□□ -2
CD46-210ENST00000462968 CRACR2AQ9BSW2 395 aa2.54□□□□□ -2
CD46-210ENST00000462968 DPH7Q9BTV6 452 aa2.54□□□□□ -2
CD46-210ENST00000462968 NTMT1Q9BV86 223 aa2.54□□□□□ -2
CD46-210ENST00000462968 SNRNP25Q9BV90 132 aaKnown RBP2.54□□□□□ -2
CD46-210ENST00000462968 SUCNR1Q9BXA5 334 aa2.54□□□□□ -2
CD46-210ENST00000462968 KLHL4Q9C0H6 718 aa2.54□□□□□ -2
CD46-210ENST00000462968 BCO1Q9HAY6 547 aa2.54□□□□□ -2
CD46-210ENST00000462968 LANCL2Q9NS86 450 aa2.54□□□□□ -2
CD46-210ENST00000462968 DDX28Q9NUL7 540 aaKnown RBP2.54□□□□□ -2
CD46-210ENST00000462968 ETNK2Q9NVF9 386 aa2.54□□□□□ -2
CD46-210ENST00000462968 DNAJC11Q9NVH1 559 aa2.54□□□□□ -2
CD46-210ENST00000462968 ADAM22Q9P0K1 906 aa2.54□□□□□ -2
CD46-210ENST00000462968 HCN3Q9P1Z3 774 aa2.54□□□□□ -2
CD46-210ENST00000462968 PCSK1NQ9UHG2 260 aa2.54□□□□□ -2
CD46-210ENST00000462968 SLC23A1Q9UHI7 598 aa2.54□□□□□ -2
CD46-210ENST00000462968 TRHDEQ9UKU6 1024 aa2.54□□□□□ -2
CD46-210ENST00000462968 SLC39A10Q9ULF5 831 aa2.54□□□□□ -2
CD46-210ENST00000462968 USP22Q9UPT9 525 aa2.54□□□□□ -2
CD46-210ENST00000462968 MAPRE3Q9UPY8 281 aa2.54□□□□□ -2
CD46-210ENST00000462968 RNF115Q9Y4L5 304 aa2.54□□□□□ -2
CD46-210ENST00000462968 ATG4BQ9Y4P1 393 aa2.54□□□□□ -2
CD46-210ENST00000462968 PHF3Q92576 2039 aaKnown RBP2.54□□□□□ -2
CD46-210ENST00000462968 TENM3Q9P273 2699 aa2.54□□□□□ -2
CD46-210ENST00000462968 DOCK4Q8N1I0 1966 aa2.53□□□□□ -2
CD46-210ENST00000462968 IGHV4-61A0A0C4DH41 118 aa2.53□□□□□ -2
CD46-210ENST00000462968 AGAP14A8MT82 685 aa2.53□□□□□ -2
CD46-210ENST00000462968 H7C417 338 aa2.53□□□□□ -2
CD46-210ENST00000462968 SGK494L7N484 410 aa2.53□□□□□ -2
CD46-210ENST00000462968 MYO1FO00160 1098 aa2.53□□□□□ -2
CD46-210ENST00000462968 TIMM23O14925 209 aa2.53□□□□□ -2
CD46-210ENST00000462968 STX7O15400 261 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 BUD23O43709 281 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 TRAPPC6AO75865 159 aa2.53□□□□□ -2
CD46-210ENST00000462968 RNF8O76064 485 aa2.53□□□□□ -2
CD46-210ENST00000462968 SRP72O76094 671 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 MYO1DO94832 1006 aa2.53□□□□□ -2
CD46-210ENST00000462968 AP2A2O94973 939 aa2.53□□□□□ -2
CD46-210ENST00000462968 NDST3O95803 873 aa2.53□□□□□ -2
CD46-210ENST00000462968 ACTL6AO96019 429 aa2.53□□□□□ -2
CD46-210ENST00000462968 C1QAP02745 245 aa2.53□□□□□ -2
CD46-210ENST00000462968 CALB1P05937 261 aa2.53□□□□□ -2
CD46-210ENST00000462968 HPNP05981 417 aa2.53□□□□□ -2
CD46-210ENST00000462968 FHP07954 510 aa2.53□□□□□ -2
CD46-210ENST00000462968 CHRM2P08172 466 aa2.53□□□□□ -2
CD46-210ENST00000462968 NHLRC4P0CG21 123 aaPredicted RBP2.53□□□□□ -2
CD46-210ENST00000462968 CCL3P10147 92 aa2.53□□□□□ -2
CD46-210ENST00000462968 ATP1A3P13637 1013 aa2.53□□□□□ -2
CD46-210ENST00000462968 CPN1P15169 458 aa2.53□□□□□ -2
CD46-210ENST00000462968 EZRP15311 586 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 ZNF23P17027 643 aa2.53□□□□□ -2
CD46-210ENST00000462968 DRD4P21917 467 aa2.53□□□□□ -2
CD46-210ENST00000462968 GATA3P23771 443 aa2.53□□□□□ -2
CD46-210ENST00000462968 PON1P27169 355 aa2.53□□□□□ -2
CD46-210ENST00000462968 GDF1P27539 372 aa2.53□□□□□ -2
CD46-210ENST00000462968 CMPK1P30085 196 aa2.53□□□□□ -2
CD46-210ENST00000462968 PIGAP37287 484 aa2.53□□□□□ -2
CD46-210ENST00000462968 NSFP46459 744 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 THBS3P49746 956 aa2.53□□□□□ -2
CD46-210ENST00000462968 EFNA4P52798 201 aa2.53□□□□□ -2
CD46-210ENST00000462968 DVL1P1P54792 670 aaPredicted RBP2.53□□□□□ -2
CD46-210ENST00000462968 UBA52P62987 128 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 PHC1P78364 1004 aa2.53□□□□□ -2
CD46-210ENST00000462968 RELAQ04206 551 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms