RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 ZNF629Q9UEG4 869 aaPredicted RBP14.71□□□□□ -0.05
COL7A1-204ENST00000462475 MTRF1LQ9UGC7 380 aaKnown RBP14.71□□□□□ -0.05
COL7A1-204ENST00000462475 PCTPQ9UKL6 214 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 ACANP16112 2415 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 IL2RAP01589 272 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 ABCB1P08183 1280 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-204ENST00000462475 PTPN6P29350 595 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 AGFG1P52594 562 aaKnown RBP14.7□□□□□ -0.06
COL7A1-204ENST00000462475 RPP38P78345 283 aaKnown RBP14.7□□□□□ -0.06
COL7A1-204ENST00000462475 SLC7A5Q01650 507 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 KRTAP21-3Q3LHN1 58 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 CCNYL2Q5T2Q4 361 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 C6orf163Q5TEZ5 329 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 TIGD3Q6B0B8 471 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 TTC19Q6DKK2 380 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-204ENST00000462475 VWA5B2Q8N398 1253 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 C17orf53Q8N3J3 647 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-204ENST00000462475 SIMC1Q8NDZ2 872 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 CHDHQ8NE62 594 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-204ENST00000462475 C17orf47Q8NEP4 570 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 OR7G1Q8NGA0 311 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 LRRC46Q96FV0 321 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 WDYHV1Q96HA8 205 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 NTMT1Q9BV86 223 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 ITPAQ9BY32 194 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 ZDHHC18Q9NUE0 388 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 NINJ2Q9NZG7 142 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 XPR1Q9UBH6 696 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 NIPBLQ6KC79 2804 aaeCLIP14.7□□□□□ -0.06
COL7A1-204ENST00000462475 KIAA1549Q9HCM3 1950 aa14.7□□□□□ -0.06
COL7A1-204ENST00000462475 ABCA4P78363 2273 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 A0A1B0GTL3 188 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 MBD3L4A6NDZ8 208 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-204ENST00000462475 MBD3L3A6NE82 208 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-204ENST00000462475 MBD3L5A6NJ08 208 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-204ENST00000462475 CD8B2A6NJW9 211 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 PPM1BO75688 479 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 PORP16435 677 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-204ENST00000462475 KRT15P19012 456 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 KLK2P20151 261 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 DNASE1P24855 282 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 CASQ1P31415 396 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 SOX18P35713 384 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 MAGEA12P43365 314 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 MAPK12P53778 367 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 NAGLUP54802 743 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 DUSP2Q05923 314 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 MGAT2Q10469 447 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 FOXD4Q12950 439 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-204ENST00000462475 IFT88Q13099 833 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 EXOSC7Q15024 291 aaKnown RBP14.69□□□□□ -0.06
COL7A1-204ENST00000462475 SGO1Q5FBB7 561 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 SLC48A1Q6P1K1 146 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 FAM111BQ6SJ93 734 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 ANGPTL8Q6UXH0 198 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 RPS27LQ71UM5 84 aaKnown RBP14.69□□□□□ -0.06
COL7A1-204ENST00000462475 PAGE2Q7Z2X7 111 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 COMMD6Q7Z4G1 85 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 YRDCQ86U90 279 aaKnown RBP14.69□□□□□ -0.06
COL7A1-204ENST00000462475 METTL4Q8N3J2 472 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 FAM83FQ8NEG4 500 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-204ENST00000462475 GOT1L1Q8NHS2 421 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-204ENST00000462475 MBD3L2Q8NHZ7 208 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-204ENST00000462475 HGDQ93099 445 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 ABTB1Q969K4 478 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-204ENST00000462475 NODALQ96S42 347 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 BRINP2Q9C0B6 783 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 EPB41L4BQ9H329 900 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 ACSS3Q9H6R3 686 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 METTL7AQ9H8H3 244 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 FARSBQ9NSD9 589 aaKnown RBP14.69□□□□□ -0.06
COL7A1-204ENST00000462475 MAT2BQ9NZL9 334 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 FOXD3Q9UJU5 478 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-204ENST00000462475 ADAM29Q9UKF5 820 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 CES1P1Q9UKY3 287 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 PCDHA9Q9Y5H5 950 aa14.69□□□□□ -0.06
COL7A1-204ENST00000462475 C2orf72A6NCS6 295 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 EEF1E1-BLOC1S5C9J1V9 151 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 STX16-NPEPL1H3BU86 382 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 STX16O14662 325 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 SNPHO15079 494 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 EEF1E1O43324 174 aaKnown RBP14.68□□□□□ -0.06
COL7A1-204ENST00000462475 FEN1P39748 380 aaKnown RBP14.68□□□□□ -0.06
COL7A1-204ENST00000462475 PTGDSP41222 190 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 PPP2R2AP63151 447 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 GALNT1Q10472 559 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-204ENST00000462475 DAZAP2Q15038 168 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-204ENST00000462475 PRICKLE4Q2TBC4 344 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 GGTA1PQ4G0N0 100 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 PAMR1Q6UXH9 720 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 ZNF572Q7Z3I7 529 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-204ENST00000462475 C9orf106Q8NAJ2 232 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 OR4F6Q8NGB9 312 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 OR1J4Q8NGS1 313 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 LINC01560Q8TB33 94 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 ISL2Q96A47 359 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 OMA1Q96E52 524 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 OSBPL11Q9BXB4 747 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 ELOVL6Q9H5J4 265 aa14.68□□□□□ -0.06
COL7A1-204ENST00000462475 GALNT9Q9HCQ5 603 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms